=>> Building science/py-scikit-sparse build started at Thu Sep 25 13:30:16 EDT 2025 port directory: /usr/ports/science/py-scikit-sparse package name: py311-scikit-sparse-0.4.16_1 building for: FreeBSD pkg.DaveG.ca 15.0-ALPHA3 FreeBSD 15.0-ALPHA3 1500064 amd64 maintained by: yuri@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 1004 Aug 6 08:11 /usr/ports/science/py-scikit-sparse/Makefile Ports top last git commit: a936fb9b16ba Ports top unclean checkout: no Port dir last git commit: 935de0247eab Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.2 Host OSVERSION: 1500064 Jail OSVERSION: 1500064 Job Id: 07 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1500064 UNAME_v=FreeBSD 15.0-ALPHA3 1500064 UNAME_r=15.0-ALPHA3 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.2 MASTERMNT=/usr/local/poudriere/data/.m/freebsd_15_c_x64-HEAD-ALL/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=tmux-256color OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/freebsd_15_c_x64-HEAD-ALL/07/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=freebsd_15_c_x64-HEAD-ALL SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/freebsd_15_c_x64-HEAD-ALL/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.2 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -I/usr/local/include/suitesparse -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -shared -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -I/usr/local/include/suitesparse -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd15 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=15.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/scikit-sparse" EXAMPLESDIR="share/examples/scikit-sparse" DATADIR="share/scikit-sparse" WWWDIR="www/scikit-sparse" ETCDIR="etc/scikit-sparse" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd15 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/scikit-sparse DOCSDIR=/usr/local/share/doc/scikit-sparse EXAMPLESDIR=/usr/local/share/examples/scikit-sparse WWWDIR=/usr/local/www/scikit-sparse ETCDIR=/usr/local/etc/scikit-sparse --End SUB_LIST-- ---Begin make.conf--- DEFAULT_VERSIONS+=pgsql=15 DEFAULT_VERSIONS+=php=82 DISABLE_LICENSES=yes SELECTED_OPTIONS+=OPENBLAS ARCHDEF=AMD64K10h64SSE3 USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### DEFAULT_VERSIONS+=pgsql=15 DEFAULT_VERSIONS+=php=82 DISABLE_LICENSES=yes SELECTED_OPTIONS+=OPENBLAS ARCHDEF=AMD64K10h64SSE3 WITH_CCACHE_BUILD=yes CCACHE_DIR=/root/.ccache #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-scikit-sparse-0.4.16_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.3.1.pkg [pkg.DaveG.ca] Installing pkg-2.3.1... [pkg.DaveG.ca] Extracting pkg-2.3.1: .......... done ===> py311-scikit-sparse-0.4.16_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-scikit-sparse-0.4.16_1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-scikit-sparse-0.4.16_1 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-scikit-sparse-0.4.16_1 for building => SHA256 Checksum OK for scikit-sparse-scikit-sparse-v0.4.16_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-scikit-sparse-0.4.16_1 for building ===> Extracting for py311-scikit-sparse-0.4.16_1 => SHA256 Checksum OK for scikit-sparse-scikit-sparse-v0.4.16_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for py311-scikit-sparse-0.4.16_1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-scikit-sparse-0.4.16_1 depends on package: py311-numpy>=1.16,1<1.27,1 - not found ===> Installing existing package /packages/All/py311-numpy-1.26.4_7,1.pkg [pkg.DaveG.ca] Installing py311-numpy-1.26.4_7,1... [pkg.DaveG.ca] `-- Installing gcc13-13.3.0_3... [pkg.DaveG.ca] | `-- Installing binutils-2.44,1... [pkg.DaveG.ca] | | `-- Installing indexinfo-0.3.1_1... [pkg.DaveG.ca] | | `-- Extracting indexinfo-0.3.1_1: . done [pkg.DaveG.ca] | | `-- Installing zstd-1.5.7... [pkg.DaveG.ca] | | `-- Installing liblz4-1.10.0,1... [pkg.DaveG.ca] | | `-- Extracting liblz4-1.10.0,1: .......... done [pkg.DaveG.ca] | | `-- Extracting zstd-1.5.7: .......... done [pkg.DaveG.ca] | `-- Extracting binutils-2.44,1: .......... done [pkg.DaveG.ca] | `-- Installing gmp-6.3.0... [pkg.DaveG.ca] | `-- Extracting gmp-6.3.0: .......... done [pkg.DaveG.ca] | `-- Installing mpc-1.3.1_1... [pkg.DaveG.ca] | | `-- Installing mpfr-4.2.2,1... [pkg.DaveG.ca] | | `-- Extracting mpfr-4.2.2,1: .......... done [pkg.DaveG.ca] | `-- Extracting mpc-1.3.1_1: ...... done [pkg.DaveG.ca] `-- Extracting gcc13-13.3.0_3: .......... done [pkg.DaveG.ca] `-- Installing openblas-0.3.30,2... [pkg.DaveG.ca] `-- Extracting openblas-0.3.30,2: .......... done [pkg.DaveG.ca] `-- Installing python311-3.11.13_1... [pkg.DaveG.ca] | `-- Installing gettext-runtime-0.23.1... [pkg.DaveG.ca] | `-- Extracting gettext-runtime-0.23.1: .......... done [pkg.DaveG.ca] | `-- Installing libffi-3.5.1... [pkg.DaveG.ca] | `-- Extracting libffi-3.5.1: .......... done [pkg.DaveG.ca] | `-- Installing mpdecimal-4.0.1... [pkg.DaveG.ca] | `-- Extracting mpdecimal-4.0.1: .......... done [pkg.DaveG.ca] | `-- Installing readline-8.2.13_2... [pkg.DaveG.ca] | `-- Extracting readline-8.2.13_2: .......... done [pkg.DaveG.ca] `-- Extracting python311-3.11.13_1: .......... done [pkg.DaveG.ca] `-- Installing suitesparse-umfpack-6.3.6... [pkg.DaveG.ca] | `-- Installing suitesparse-amd-3.3.4... [pkg.DaveG.ca] | | `-- Installing suitesparse-config-7.11.0... [pkg.DaveG.ca] | | `-- Extracting suitesparse-config-7.11.0: .......... done [pkg.DaveG.ca] | `-- Extracting suitesparse-amd-3.3.4: .......... done [pkg.DaveG.ca] | `-- Installing suitesparse-camd-3.3.5... [pkg.DaveG.ca] | `-- Extracting suitesparse-camd-3.3.5: .......... done [pkg.DaveG.ca] | `-- Installing suitesparse-ccolamd-3.3.5... [pkg.DaveG.ca] | `-- Extracting suitesparse-ccolamd-3.3.5: .......... done [pkg.DaveG.ca] | `-- Installing suitesparse-cholmod-5.3.4... [pkg.DaveG.ca] | | `-- Installing suitesparse-colamd-3.3.5... [pkg.DaveG.ca] | | `-- Extracting suitesparse-colamd-3.3.5: .......... done [pkg.DaveG.ca] | `-- Extracting suitesparse-cholmod-5.3.4: .......... done [pkg.DaveG.ca] `-- Extracting suitesparse-umfpack-6.3.6: .......... done [pkg.DaveG.ca] Extracting py311-numpy-1.26.4_7,1: .......... done ===== Message from gcc13-13.3.0_3: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc13 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from python311-3.11.13_1: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-scikit-sparse-0.4.16_1 depends on package: py311-numpy>=1.16,1<1.27,1 - found ===> Returning to build of py311-scikit-sparse-0.4.16_1 ===> py311-scikit-sparse-0.4.16_1 depends on package: py311-scipy>=0.19 - not found ===> Installing existing package /packages/All/py311-scipy-1.11.1_4,1.pkg [pkg.DaveG.ca] Installing py311-scipy-1.11.1_4,1... [pkg.DaveG.ca] `-- Installing blas-3.12.1... [pkg.DaveG.ca] `-- Extracting blas-3.12.1: ..... done [pkg.DaveG.ca] Extracting py311-scipy-1.11.1_4,1: .......... done ===> py311-scikit-sparse-0.4.16_1 depends on package: py311-scipy>=0.19 - found ===> Returning to build of py311-scikit-sparse-0.4.16_1 ===> py311-scikit-sparse-0.4.16_1 depends on executable: gfortran13 - found ===> py311-scikit-sparse-0.4.16_1 depends on file: /usr/local/bin/python3.11 - found ===> py311-scikit-sparse-0.4.16_1 depends on executable: gfortran13 - found ===> py311-scikit-sparse-0.4.16_1 depends on package: py311-cython>=0.29.37<3 - not found ===> Installing existing package /packages/All/py311-cython-0.29.37_2.pkg [pkg.DaveG.ca] Installing py311-cython-0.29.37_2... [pkg.DaveG.ca] Extracting py311-cython-0.29.37_2: .......... done ===> py311-scikit-sparse-0.4.16_1 depends on package: py311-cython>=0.29.37<3 - found ===> Returning to build of py311-scikit-sparse-0.4.16_1 ===> py311-scikit-sparse-0.4.16_1 depends on package: py311-setuptools>=63.1.0 - not found ===> Installing existing package /packages/All/py311-setuptools-63.1.0_3.pkg [pkg.DaveG.ca] Installing py311-setuptools-63.1.0_3... [pkg.DaveG.ca] Extracting py311-setuptools-63.1.0_3: .......... done ===> py311-scikit-sparse-0.4.16_1 depends on package: py311-setuptools>=63.1.0 - found ===> Returning to build of py311-scikit-sparse-0.4.16_1 ===> py311-scikit-sparse-0.4.16_1 depends on file: /usr/local/bin/python3.11 - found ===> py311-scikit-sparse-0.4.16_1 depends on file: /usr/local/bin/as - found ===> py311-scikit-sparse-0.4.16_1 depends on file: /usr/local/bin/ccache - not found ===> Installing existing package /packages/All/ccache-3.7.12_8.pkg [pkg.DaveG.ca] Installing ccache-3.7.12_8... [pkg.DaveG.ca] Extracting ccache-3.7.12_8: ......... done Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc13 create symlink for gcc13 (world) create symlink for g++13 create symlink for g++13 (world) create symlink for cpp13 create symlink for cpp13 (world) create symlink for clang create symlink for clang (world) create symlink for clang++ create symlink for clang++ (world) ===== Message from ccache-3.7.12_8: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. ===> py311-scikit-sparse-0.4.16_1 depends on file: /usr/local/bin/ccache - found ===> Returning to build of py311-scikit-sparse-0.4.16_1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-scikit-sparse-0.4.16_1 depends on shared library: libumfpack.so - found (/usr/local/lib/libumfpack.so) ===> py311-scikit-sparse-0.4.16_1 depends on shared library: libcholmod.so - found (/usr/local/lib/libcholmod.so) =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for py311-scikit-sparse-0.4.16_1 /bin/sh: brew: not found Compiling sksparse/cholmod.pyx because it changed. [1/1] Cythonizing sksparse/cholmod.pyx running config =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for py311-scikit-sparse-0.4.16_1 /bin/sh: brew: not found running build running build_py creating build creating build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311 creating build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse copying sksparse/__init__.py -> build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse copying sksparse/test_cholmod.py -> build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse creating build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data copying sksparse/test_data/well1033.mtx.gz -> build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data copying sksparse/test_data/well1850.mtx.gz -> build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data copying sksparse/test_data/illc1850_rhs1.mtx.gz -> build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data copying sksparse/test_data/illc1850.mtx.gz -> build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data copying sksparse/test_data/well1850_rhs1.mtx.gz -> build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data copying sksparse/test_data/well1033_rhs1.mtx.gz -> build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data copying sksparse/test_data/illc1033.mtx.gz -> build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data copying sksparse/test_data/illc1033_rhs1.mtx.gz -> build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data running build_ext building 'sksparse.cholmod' extension creating build/temp.freebsd-15.0-ALPHA3-amd64-cpython-311 creating build/temp.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -I/usr/local/include/suitesparse -fstack-protector-strong -fno-strict-aliasing -fPIC -Isksparse -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include -I/usr/include/suitesparse -I/dev/null/include/suitesparse/ -I/usr/local/include/python3.11 -c sksparse/cholmod.c -o build/temp.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/cholmod.o In file included from sksparse/cholmod.c:785: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ sksparse/cholmod.c:21963:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 21963 | CYTHON_FALLTHROUGH; | ^ sksparse/cholmod.c:378:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 378 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ sksparse/cholmod.c:21974:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 21974 | CYTHON_FALLTHROUGH; | ^ sksparse/cholmod.c:378:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 378 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ 3 warnings generated. cc -shared -shared -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -O2 -pipe -I/usr/local/include/suitesparse -fstack-protector-strong -fno-strict-aliasing build/temp.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/cholmod.o -L/dev/null/lib -L/usr/local/lib -lcholmod -o build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/cholmod.cpython-311.so =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-scikit-sparse-0.4.16_1 depends on package: py311-numpy>=1.16,1<1.27,1 - found ===> py311-scikit-sparse-0.4.16_1 depends on package: py311-scipy>=0.19 - found ===> py311-scikit-sparse-0.4.16_1 depends on executable: gfortran13 - found ===> py311-scikit-sparse-0.4.16_1 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for py311-scikit-sparse-0.4.16_1 ===> Generating temporary packing list /bin/sh: brew: not found running install /usr/local/lib/python3.11/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running build_ext running install_lib creating /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11 creating /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages creating /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse copying build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/__init__.py -> /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse copying build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/cholmod.cpython-311.so -> /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse creating /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse/test_data copying build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data/well1033.mtx.gz -> /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse/test_data copying build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data/well1850.mtx.gz -> /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse/test_data copying build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data/illc1850_rhs1.mtx.gz -> /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse/test_data copying build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data/illc1850.mtx.gz -> /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse/test_data copying build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data/well1850_rhs1.mtx.gz -> /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse/test_data copying build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data/well1033_rhs1.mtx.gz -> /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse/test_data copying build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data/illc1033.mtx.gz -> /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse/test_data copying build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_data/illc1033_rhs1.mtx.gz -> /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse/test_data copying build/lib.freebsd-15.0-ALPHA3-amd64-cpython-311/sksparse/test_cholmod.py -> /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse byte-compiling /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/sksparse/test_cholmod.py to test_cholmod.cpython-311.pyc writing byte-compilation script '/tmp/tmpdslwkmsq.py' /usr/local/bin/python3.11 /tmp/tmpdslwkmsq.py removing /tmp/tmpdslwkmsq.py running install_egg_info running egg_info creating scikit_sparse.egg-info writing scikit_sparse.egg-info/PKG-INFO writing dependency_links to scikit_sparse.egg-info/dependency_links.txt writing requirements to scikit_sparse.egg-info/requires.txt writing top-level names to scikit_sparse.egg-info/top_level.txt writing manifest file 'scikit_sparse.egg-info/SOURCES.txt' reading manifest file 'scikit_sparse.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.txt' writing manifest file 'scikit_sparse.egg-info/SOURCES.txt' Copying scikit_sparse.egg-info to /wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/stage/usr/local/lib/python3.11/site-packages/scikit_sparse-0.4.16-py3.11.egg-info running install_scripts writing list of installed files to '/wrkdirs/usr/ports/science/py-scikit-sparse/work-py311/.PLIST.pymodtmp' ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2025-09-25T17:30:16+0000' 'PKG_NOTE_ports_top_git_hash=a936fb9b16ba' 'PKG_NOTE_ports_top_checkout_unclean=no' 'PKG_NOTE_port_git_hash=935de0247eab' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.2' NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building packages for py311-scikit-sparse-0.4.16_1 ===> Building py311-scikit-sparse-0.4.16_1 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for py311-scikit-sparse-0.4.16_1 build of science/py-scikit-sparse@py311 | py311-scikit-sparse-0.4.16_1 ended at Thu Sep 25 13:33:34 EDT 2025 build time: 00:03:21