=>> Building science/py-arbor build started at Fri Mar 13 06:04:02 EDT 2026 port directory: /usr/ports/science/py-arbor package name: py311-arbor-0.11.0 building for: FreeBSD pkg.DaveG.ca 14.4-RELEASE FreeBSD 14.4-RELEASE 1404000 amd64 maintained by: yuri@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 1562 Nov 8 22:00 /usr/ports/science/py-arbor/Makefile Ports top last git commit: 26b198eb3ee3 Ports top unclean checkout: no Port dir last git commit: 1d693e58083f Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.2 Host OSVERSION: 1500068 Jail OSVERSION: 1404000 Job Id: 05 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1404000 UNAME_v=FreeBSD 14.4-RELEASE 1404000 UNAME_r=14.4-RELEASE BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.2 MASTERMNT=/usr/local/poudriere/data/.m/freebsd_14_4_x64-HEAD-ALL/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=tmux-256color OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/freebsd_14_4_x64-HEAD-ALL/05/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=freebsd_14_4_x64-HEAD-ALL SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/freebsd_14_4_x64-HEAD-ALL/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.2 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-arbor/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-arbor/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- NINJA_STATUS="[%p %s/%t] " XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-arbor/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-arbor/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/py-arbor/work-py311/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=14.4 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/arbor" EXAMPLESDIR="share/examples/arbor" DATADIR="share/arbor" WWWDIR="www/arbor" ETCDIR="etc/arbor" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/arbor DOCSDIR=/usr/local/share/doc/arbor EXAMPLESDIR=/usr/local/share/examples/arbor WWWDIR=/usr/local/www/arbor ETCDIR=/usr/local/etc/arbor --End SUB_LIST-- ---Begin make.conf--- DEFAULT_VERSIONS+=pgsql=15 DEFAULT_VERSIONS+=php=82 DISABLE_LICENSES=yes SELECTED_OPTIONS+=OPENBLAS ARCHDEF=AMD64K10h64SSE3 USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### DEFAULT_VERSIONS+=pgsql=15 DEFAULT_VERSIONS+=php=82 DISABLE_LICENSES=yes SELECTED_OPTIONS+=OPENBLAS ARCHDEF=AMD64K10h64SSE3 WITH_CCACHE_BUILD=yes CCACHE_DIR=/root/.ccache #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-arbor-0.11.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.6.2.pkg [pkg.DaveG.ca] Installing pkg-2.6.2... [pkg.DaveG.ca] Extracting pkg-2.6.2: .......... done ===> py311-arbor-0.11.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-arbor-0.11.0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-arbor-0.11.0 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-arbor-0.11.0 for building => SHA256 Checksum OK for arbor-sim-arbor-v0.11.0_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-arbor-0.11.0 for building ===> Extracting for py311-arbor-0.11.0 => SHA256 Checksum OK for arbor-sim-arbor-v0.11.0_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for py311-arbor-0.11.0 ===> Applying FreeBSD patches for py311-arbor-0.11.0 from /usr/ports/science/py-arbor/files =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-arbor-0.11.0 depends on executable: gmake - not found ===> Installing existing package /packages/All/gmake-4.4.1.pkg [pkg.DaveG.ca] Installing gmake-4.4.1... [pkg.DaveG.ca] `-- Installing gettext-runtime-0.26... [pkg.DaveG.ca] | `-- Installing indexinfo-0.3.1_1... [pkg.DaveG.ca] | `-- Extracting indexinfo-0.3.1_1: . done [pkg.DaveG.ca] `-- Extracting gettext-runtime-0.26: .......... done [pkg.DaveG.ca] Extracting gmake-4.4.1: .......... done ===> py311-arbor-0.11.0 depends on executable: gmake - found ===> Returning to build of py311-arbor-0.11.0 ===> py311-arbor-0.11.0 depends on package: pybind11>0 - not found ===> Installing existing package /packages/All/pybind11-3.0.1.pkg [pkg.DaveG.ca] Installing pybind11-3.0.1... [pkg.DaveG.ca] Extracting pybind11-3.0.1: .......... done ===> py311-arbor-0.11.0 depends on package: pybind11>0 - found ===> Returning to build of py311-arbor-0.11.0 ===> py311-arbor-0.11.0 depends on package: nlohmann-json>0 - not found ===> Installing existing package /packages/All/nlohmann-json-3.12.0_1.pkg [pkg.DaveG.ca] Installing nlohmann-json-3.12.0_1... [pkg.DaveG.ca] Extracting nlohmann-json-3.12.0_1: .......... done ===> py311-arbor-0.11.0 depends on package: nlohmann-json>0 - found ===> Returning to build of py311-arbor-0.11.0 ===> py311-arbor-0.11.0 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-core-3.31.10_1.pkg [pkg.DaveG.ca] Installing cmake-core-3.31.10_1... [pkg.DaveG.ca] `-- Installing expat-2.7.4... [pkg.DaveG.ca] `-- Extracting expat-2.7.4: .......... done [pkg.DaveG.ca] `-- Installing jsoncpp-1.9.6_1... [pkg.DaveG.ca] `-- Extracting jsoncpp-1.9.6_1: .......... done [pkg.DaveG.ca] `-- Installing libidn2-2.3.8... [pkg.DaveG.ca] | `-- Installing libunistring-1.4.2... [pkg.DaveG.ca] | `-- Extracting libunistring-1.4.2: .......... done [pkg.DaveG.ca] `-- Extracting libidn2-2.3.8: .......... done [pkg.DaveG.ca] `-- Installing libuv-1.52.0... [pkg.DaveG.ca] `-- Extracting libuv-1.52.0: .......... done [pkg.DaveG.ca] `-- Installing rhash-1.4.6... [pkg.DaveG.ca] `-- Extracting rhash-1.4.6: .......... done [pkg.DaveG.ca] Extracting cmake-core-3.31.10_1: .......... done ===> py311-arbor-0.11.0 depends on file: /usr/local/bin/cmake - found ===> Returning to build of py311-arbor-0.11.0 ===> py311-arbor-0.11.0 depends on executable: ninja - not found ===> Installing existing package /packages/All/ninja-1.13.2,4.pkg [pkg.DaveG.ca] Installing ninja-1.13.2,4... [pkg.DaveG.ca] `-- Installing python311-3.11.15... [pkg.DaveG.ca] | `-- Installing libffi-3.5.1... [pkg.DaveG.ca] | `-- Extracting libffi-3.5.1: .......... done [pkg.DaveG.ca] | `-- Installing mpdecimal-4.0.1... [pkg.DaveG.ca] | `-- Extracting mpdecimal-4.0.1: .......... done [pkg.DaveG.ca] | `-- Installing readline-8.3.3... [pkg.DaveG.ca] | `-- Extracting readline-8.3.3: .......... done [pkg.DaveG.ca] `-- Extracting python311-3.11.15: .......... done [pkg.DaveG.ca] Extracting ninja-1.13.2,4: ..... done ===== Message from python311-3.11.15: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-arbor-0.11.0 depends on executable: ninja - found ===> Returning to build of py311-arbor-0.11.0 ===> py311-arbor-0.11.0 depends on file: /usr/local/bin/python3.11 - found ===> py311-arbor-0.11.0 depends on file: /usr/local/bin/ccache - not found ===> Installing existing package /packages/All/ccache-3.7.12_8.pkg [pkg.DaveG.ca] Installing ccache-3.7.12_8... [pkg.DaveG.ca] Extracting ccache-3.7.12_8: ......... done Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for clang create symlink for clang (world) create symlink for clang++ create symlink for clang++ (world) ===== Message from ccache-3.7.12_8: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. ===> py311-arbor-0.11.0 depends on file: /usr/local/bin/ccache - found ===> Returning to build of py311-arbor-0.11.0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-arbor-0.11.0 depends on shared library: libarbor.so - not found ===> Installing existing package /packages/All/arbor-0.11.0_1.pkg [pkg.DaveG.ca] Installing arbor-0.11.0_1... [pkg.DaveG.ca] `-- Installing hwloc2-2.12.1_1... [pkg.DaveG.ca] | `-- Installing level-zero-1.26.3_1... [pkg.DaveG.ca] | | `-- Installing libfmt-12.1.0... [pkg.DaveG.ca] | | `-- Extracting libfmt-12.1.0: .......... done [pkg.DaveG.ca] | | `-- Installing spdlog-1.17.0... [pkg.DaveG.ca] | | `-- Extracting spdlog-1.17.0: .......... done [pkg.DaveG.ca] | `-- Extracting level-zero-1.26.3_1: .......... done [pkg.DaveG.ca] | `-- Installing libpciaccess-0.18.1_1... [pkg.DaveG.ca] | | `-- Installing hwdata-0.405,1... [pkg.DaveG.ca] | | `-- Extracting hwdata-0.405,1: ...... done [pkg.DaveG.ca] | `-- Extracting libpciaccess-0.18.1_1: ..... done [pkg.DaveG.ca] | `-- Installing libxml2-2.15.2... [pkg.DaveG.ca] | `-- Extracting libxml2-2.15.2: .......... done [pkg.DaveG.ca] `-- Extracting hwloc2-2.12.1_1: .......... done [pkg.DaveG.ca] `-- Installing pugixml-1.15... [pkg.DaveG.ca] `-- Extracting pugixml-1.15: .......... done [pkg.DaveG.ca] `-- Installing py311-svgwrite-1.4.3_1... [pkg.DaveG.ca] `-- Extracting py311-svgwrite-1.4.3_1: .......... done [pkg.DaveG.ca] `-- Installing units-library-0.13.1... [pkg.DaveG.ca] `-- Extracting units-library-0.13.1: .......... done [pkg.DaveG.ca] Extracting arbor-0.11.0_1: .......... done ===> py311-arbor-0.11.0 depends on shared library: libarbor.so - found (/usr/local/lib/libarbor.so) ===> Returning to build of py311-arbor-0.11.0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for py311-arbor-0.11.0 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/science/py-arbor/work-py311/.build CMake Warning (dev) in CMakeLists.txt: No project() command is present. The top-level CMakeLists.txt file must contain a literal, direct call to the project() command. Add a line of code such as project(ProjectName) near the top of the file, but after cmake_minimum_required(). CMake is pretending there is a "project(Project)" command on the first line. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) in CMakeLists.txt: cmake_minimum_required() should be called prior to this top-level project() call. Please see the cmake-commands(7) manual for usage documentation of both commands. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is Clang 19.1.7 -- The CXX compiler identification is Clang 19.1.7 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/libexec/ccache/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/libexec/ccache/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python3: /usr/local/bin/python3.11 (found version "3.11.15") found components: Interpreter Development Development.Module Development.Embed -- Performing Test HAS_FLTO_THIN -- Performing Test HAS_FLTO_THIN - Success -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/local/include (found version "3.0.1") -- Configuring done (14.4s) -- Generating done (0.4s) CMake Warning: Manually-specified variables were not used by the project: BOOST_PYTHON_SUFFIX CMAKE_COLOR_MAKEFILE CMAKE_C_FLAGS_RELEASE CMAKE_SHARED_LINKER_FLAGS CMAKE_VERBOSE_MAKEFILE FETCHCONTENT_FULLY_DISCONNECTED Python_ADDITIONAL_VERSIONS Python_EXECUTABLE THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /wrkdirs/usr/ports/science/py-arbor/work-py311/.build =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for py311-arbor-0.11.0 [ 4% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/remote.cpp.o -MF CMakeFiles/pyarb_obj.dir/remote.cpp.o.d -o CMakeFiles/pyarb_obj.dir/remote.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/remote.cpp [ 8% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/mpi.cpp.o -MF CMakeFiles/pyarb_obj.dir/mpi.cpp.o.d -o CMakeFiles/pyarb_obj.dir/mpi.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/mpi.cpp [ 12% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/error.cpp.o -MF CMakeFiles/pyarb_obj.dir/error.cpp.o.d -o CMakeFiles/pyarb_obj.dir/error.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/error.cpp [ 16% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/profiler.cpp.o -MF CMakeFiles/pyarb_obj.dir/profiler.cpp.o.d -o CMakeFiles/pyarb_obj.dir/profiler.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/profiler.cpp [ 20% 23/24] /usr/local/libexec/ccache/c++ -DARB_BINARY=\"bin\" -DARB_CXX_COMPILER=\"/usr/local/libexec/ccache/c++\" -DARB_DATA=\"share\" -DARB_LIB=\"lib\" -DARB_PREFIX=\"/usr/local\" -DARB_PYTHON_LIB_PATH=\"/usr/local/lib/python3.11/site-packages\" -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/config.cpp.o -MF CMakeFiles/pyarb_obj.dir/config.cpp.o.d -o CMakeFiles/pyarb_obj.dir/config.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/config.cpp [ 25% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/event_generator.cpp.o -MF CMakeFiles/pyarb_obj.dir/event_generator.cpp.o.d -o CMakeFiles/pyarb_obj.dir/event_generator.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/event_generator.cpp [ 29% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/context.cpp.o -MF CMakeFiles/pyarb_obj.dir/context.cpp.o.d -o CMakeFiles/pyarb_obj.dir/context.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/context.cpp [ 33% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/schedule.cpp.o -MF CMakeFiles/pyarb_obj.dir/schedule.cpp.o.d -o CMakeFiles/pyarb_obj.dir/schedule.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/schedule.cpp [ 37% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/units.cpp.o -MF CMakeFiles/pyarb_obj.dir/units.cpp.o.d -o CMakeFiles/pyarb_obj.dir/units.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/units.cpp [ 41% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/env.cpp.o -MF CMakeFiles/pyarb_obj.dir/env.cpp.o.d -o CMakeFiles/pyarb_obj.dir/env.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/env.cpp [ 45% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/pyarb.cpp.o -MF CMakeFiles/pyarb_obj.dir/pyarb.cpp.o.d -o CMakeFiles/pyarb_obj.dir/pyarb.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/pyarb.cpp [ 50% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/network.cpp.o -MF CMakeFiles/pyarb_obj.dir/network.cpp.o.d -o CMakeFiles/pyarb_obj.dir/network.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/network.cpp [ 54% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/label_dict.cpp.o -MF CMakeFiles/pyarb_obj.dir/label_dict.cpp.o.d -o CMakeFiles/pyarb_obj.dir/label_dict.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/label_dict.cpp [ 58% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/mechanism.cpp.o -MF CMakeFiles/pyarb_obj.dir/mechanism.cpp.o.d -o CMakeFiles/pyarb_obj.dir/mechanism.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/mechanism.cpp In file included from /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/mechanism.cpp:13: /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/util.hpp:28:48: warning: 'get_type' is deprecated: Call py::type::handle_of(h) or py::type::of(h) instead of h.get_type() [-Wdeprecated-declarations] 28 | std::string{py::str(fn.get_type())})); | ^ /usr/local/include/pybind11/detail/../pytypes.h:215:5: note: 'get_type' has been explicitly marked deprecated here 215 | PYBIND11_DEPRECATED("Call py::type::handle_of(h) or py::type::of(h) instead of h.get_type()") | ^ /usr/local/include/pybind11/detail/common.h:171:43: note: expanded from macro 'PYBIND11_DEPRECATED' 171 | # define PYBIND11_DEPRECATED(reason) [[deprecated(reason)]] | ^ 1 warning generated. [ 62% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/domain_decomposition.cpp.o -MF CMakeFiles/pyarb_obj.dir/domain_decomposition.cpp.o.d -o CMakeFiles/pyarb_obj.dir/domain_decomposition.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/domain_decomposition.cpp [ 66% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/cable_cell_io.cpp.o -MF CMakeFiles/pyarb_obj.dir/cable_cell_io.cpp.o.d -o CMakeFiles/pyarb_obj.dir/cable_cell_io.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/cable_cell_io.cpp In file included from /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/cable_cell_io.cpp:13: /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/util.hpp:28:48: warning: 'get_type' is deprecated: Call py::type::handle_of(h) or py::type::of(h) instead of h.get_type() [-Wdeprecated-declarations] 28 | std::string{py::str(fn.get_type())})); | ^ /usr/local/include/pybind11/detail/../pytypes.h:215:5: note: 'get_type' has been explicitly marked deprecated here 215 | PYBIND11_DEPRECATED("Call py::type::handle_of(h) or py::type::of(h) instead of h.get_type()") | ^ /usr/local/include/pybind11/detail/common.h:171:43: note: expanded from macro 'PYBIND11_DEPRECATED' 171 | # define PYBIND11_DEPRECATED(reason) [[deprecated(reason)]] | ^ 1 warning generated. [ 70% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/single_cell_model.cpp.o -MF CMakeFiles/pyarb_obj.dir/single_cell_model.cpp.o.d -o CMakeFiles/pyarb_obj.dir/single_cell_model.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/single_cell_model.cpp [ 75% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/identifiers.cpp.o -MF CMakeFiles/pyarb_obj.dir/identifiers.cpp.o.d -o CMakeFiles/pyarb_obj.dir/identifiers.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/identifiers.cpp [ 79% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/probes.cpp.o -MF CMakeFiles/pyarb_obj.dir/probes.cpp.o.d -o CMakeFiles/pyarb_obj.dir/probes.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/probes.cpp [ 83% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/morphology.cpp.o -MF CMakeFiles/pyarb_obj.dir/morphology.cpp.o.d -o CMakeFiles/pyarb_obj.dir/morphology.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/morphology.cpp In file included from /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/morphology.cpp:23: /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/util.hpp:28:48: warning: 'get_type' is deprecated: Call py::type::handle_of(h) or py::type::of(h) instead of h.get_type() [-Wdeprecated-declarations] 28 | std::string{py::str(fn.get_type())})); | ^ /usr/local/include/pybind11/detail/../pytypes.h:215:5: note: 'get_type' has been explicitly marked deprecated here 215 | PYBIND11_DEPRECATED("Call py::type::handle_of(h) or py::type::of(h) instead of h.get_type()") | ^ /usr/local/include/pybind11/detail/common.h:171:43: note: expanded from macro 'PYBIND11_DEPRECATED' 171 | # define PYBIND11_DEPRECATED(reason) [[deprecated(reason)]] | ^ 1 warning generated. [ 87% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/simulation.cpp.o -MF CMakeFiles/pyarb_obj.dir/simulation.cpp.o.d -o CMakeFiles/pyarb_obj.dir/simulation.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/simulation.cpp [ 91% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/recipe.cpp.o -MF CMakeFiles/pyarb_obj.dir/recipe.cpp.o.d -o CMakeFiles/pyarb_obj.dir/recipe.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/recipe.cpp [ 95% 23/24] /usr/local/libexec/ccache/c++ -isystem /usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -std=c++20 -fvisibility=hidden -MD -MT CMakeFiles/pyarb_obj.dir/cells.cpp.o -MF CMakeFiles/pyarb_obj.dir/cells.cpp.o.d -o CMakeFiles/pyarb_obj.dir/cells.cpp.o -c /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/cells.cpp In file included from /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/cells.cpp:35: /wrkdirs/usr/ports/science/py-arbor/work-py311/arbor-0.11.0/python/util.hpp:28:48: warning: 'get_type' is deprecated: Call py::type::handle_of(h) or py::type::of(h) instead of h.get_type() [-Wdeprecated-declarations] 28 | std::string{py::str(fn.get_type())})); | ^ /usr/local/include/pybind11/detail/../pytypes.h:215:5: note: 'get_type' has been explicitly marked deprecated here 215 | PYBIND11_DEPRECATED("Call py::type::handle_of(h) or py::type::of(h) instead of h.get_type()") | ^ /usr/local/include/pybind11/detail/common.h:171:43: note: expanded from macro 'PYBIND11_DEPRECATED' 171 | # define PYBIND11_DEPRECATED(reason) [[deprecated(reason)]] | ^ 1 warning generated. [100% 24/24] : && /usr/local/libexec/ccache/c++ -fPIC -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -D_LIBCPP_HARDENING_MODE=_LIBCPP_HARDENING_MODE_NONE -isystem /usr/local/include -DNDEBUG -L/usr/local/lib -Xlinker --dependency-file=CMakeFiles/pyarb.dir/link.d -shared -o arbor/_arbor.cpython-311.so CMakeFiles/pyarb_obj.dir/cable_cell_io.cpp.o CMakeFiles/pyarb_obj.dir/probes.cpp.o CMakeFiles/pyarb_obj.dir/cells.cpp.o CMakeFiles/pyarb_obj.dir/config.cpp.o CMakeFiles/pyarb_obj.dir/context.cpp.o CMakeFiles/pyarb_obj.dir/domain_decomposition.cpp.o CMakeFiles/pyarb_obj.dir/error.cpp.o CMakeFiles/pyarb_obj.dir/event_generator.cpp.o CMakeFiles/pyarb_obj.dir/identifiers.cpp.o CMakeFiles/pyarb_obj.dir/mechanism.cpp.o CMakeFiles/pyarb_obj.dir/morphology.cpp.o CMakeFiles/pyarb_obj.dir/mpi.cpp.o CMakeFiles/pyarb_obj.dir/network.cpp.o CMakeFiles/pyarb_obj.dir/profiler.cpp.o CMakeFiles/pyarb_obj.dir/pyarb.cpp.o CMakeFiles/pyarb_obj.dir/label_dict.cpp.o CMakeFiles/pyarb_obj.dir/recipe.cpp.o CMakeFiles/pyarb_obj.dir/schedule.cpp.o CMakeFiles/pyarb_obj.dir/simulation.cpp.o CMakeFiles/pyarb_obj.dir/single_cell_model.cpp.o CMakeFiles/pyarb_obj.dir/env.cpp.o CMakeFiles/pyarb_obj.dir/remote.cpp.o CMakeFiles/pyarb_obj.dir/units.cpp.o -Wl,-rpath,::::::: -larbor -larborenv -larborio && : =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-arbor-0.11.0 depends on package: py311-numpy>=1.16,1<1.27,1 - not found ===> Installing existing package /packages/All/py311-numpy-1.26.4_12,1.pkg [pkg.DaveG.ca] Installing py311-numpy-1.26.4_12,1... [pkg.DaveG.ca] `-- Installing gcc14-14.2.0_4... [pkg.DaveG.ca] | `-- Installing binutils-2.44,1... [pkg.DaveG.ca] | | `-- Installing zstd-1.5.7_1... [pkg.DaveG.ca] | | `-- Extracting zstd-1.5.7_1: .......... done [pkg.DaveG.ca] | `-- Extracting binutils-2.44,1: .......... done [pkg.DaveG.ca] | `-- Installing gmp-6.3.0... [pkg.DaveG.ca] | `-- Extracting gmp-6.3.0: .......... done [pkg.DaveG.ca] | `-- Installing mpc-1.3.1_1... [pkg.DaveG.ca] | | `-- Installing mpfr-4.2.2,1... [pkg.DaveG.ca] | | `-- Extracting mpfr-4.2.2,1: .......... done [pkg.DaveG.ca] | `-- Extracting mpc-1.3.1_1: ...... done [pkg.DaveG.ca] `-- Extracting gcc14-14.2.0_4: .......... done create symlink for gcc14 create symlink for gcc14 (world) create symlink for g++14 create symlink for g++14 (world) create symlink for cpp14 create symlink for cpp14 (world) [pkg.DaveG.ca] `-- Installing openblas-0.3.30,2... [pkg.DaveG.ca] `-- Extracting openblas-0.3.30,2: .......... done [pkg.DaveG.ca] `-- Installing suitesparse-umfpack-6.3.7... [pkg.DaveG.ca] | `-- Installing suitesparse-amd-3.3.4... [pkg.DaveG.ca] | | `-- Installing suitesparse-config-7.12.2... [pkg.DaveG.ca] | | `-- Extracting suitesparse-config-7.12.2: .......... done [pkg.DaveG.ca] | `-- Extracting suitesparse-amd-3.3.4: .......... done [pkg.DaveG.ca] | `-- Installing suitesparse-camd-3.3.5... [pkg.DaveG.ca] | `-- Extracting suitesparse-camd-3.3.5: .......... done [pkg.DaveG.ca] | `-- Installing suitesparse-ccolamd-3.3.5... [pkg.DaveG.ca] | `-- Extracting suitesparse-ccolamd-3.3.5: .......... done [pkg.DaveG.ca] | `-- Installing suitesparse-cholmod-5.3.4... [pkg.DaveG.ca] | | `-- Installing suitesparse-colamd-3.3.5... [pkg.DaveG.ca] | | `-- Extracting suitesparse-colamd-3.3.5: .......... done [pkg.DaveG.ca] | `-- Extracting suitesparse-cholmod-5.3.4: .......... done [pkg.DaveG.ca] `-- Extracting suitesparse-umfpack-6.3.7: .......... done [pkg.DaveG.ca] Extracting py311-numpy-1.26.4_12,1: .......... done ===== Message from gcc14-14.2.0_4: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc14 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> py311-arbor-0.11.0 depends on package: py311-numpy>=1.16,1<1.27,1 - found ===> Returning to build of py311-arbor-0.11.0 ===> py311-arbor-0.11.0 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for py311-arbor-0.11.0 ===> Generating temporary packing list [ 0% 1/1] cd /wrkdirs/usr/ports/science/py-arbor/work-py311/.build && /usr/local/bin/cmake -DCMAKE_INSTALL_DO_STRIP=1 -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /wrkdirs/usr/ports/science/py-arbor/work-py311/stage/usr/local/lib/python3.11/site-packages/arbor/_arbor.cpython-311.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-arbor/work-py311/stage/usr/local/lib/python3.11/site-packages/arbor/_arbor.cpython-311.so" to "$ORIGIN" -- Installing: /wrkdirs/usr/ports/science/py-arbor/work-py311/stage/usr/local/lib/python3.11/site-packages/arbor/__init__.py -- Installing: /wrkdirs/usr/ports/science/py-arbor/work-py311/stage/usr/local/lib/python3.11/site-packages/arbor/VERSION ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2026-03-13T10:04:02+0000' 'PKG_NOTE_ports_top_git_hash=26b198eb3ee3' 'PKG_NOTE_ports_top_checkout_unclean=no' 'PKG_NOTE_port_git_hash=1d693e58083f' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.2' NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building packages for py311-arbor-0.11.0 ===> Building py311-arbor-0.11.0 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for py311-arbor-0.11.0 build of science/py-arbor@py311 | py311-arbor-0.11.0 ended at Fri Mar 13 06:09:11 EDT 2026 build time: 00:05:10