=>> Building science/libccp4 build started at Sun Mar 15 17:28:30 EDT 2026 port directory: /usr/ports/science/libccp4 package name: libccp4-8.0.0 building for: FreeBSD pkg.DaveG.ca 15.0-RELEASE-p3 FreeBSD 15.0-RELEASE-p3 1500068 amd64 maintained by: yuri@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 940 Jan 31 2025 /usr/ports/science/libccp4/Makefile Ports top last git commit: 8c988f802ea2 Ports top unclean checkout: no Port dir last git commit: a5c4a00572e5 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.2 Host OSVERSION: 1500068 Jail OSVERSION: 1500068 Job Id: 03 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1500068 UNAME_v=FreeBSD 15.0-RELEASE-p3 1500068 UNAME_r=15.0-RELEASE-p3 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.2 MASTERMNT=/usr/local/poudriere/data/.m/freebsd_15_0_x64-HEAD-ALL/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=tmux-256color OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/freebsd_15_0_x64-HEAD-ALL/03/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=freebsd_15_0_x64-HEAD-ALL SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/freebsd_15_0_x64-HEAD-ALL/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.2 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --enable-shared --disable-static --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran14" F90="gfortran14" FC="gfortran14" FFLAGS="-O -fPIC -std=legacy -Wl,-rpath=/usr/local/lib/gcc14" F90FLAGS="-O -fPIC -std=legacy -Wl,-rpath=/usr/local/lib/gcc14" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc14" MAKE=/usr/local/bin/gmake XDG_DATA_HOME=/wrkdirs/usr/ports/science/libccp4/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/libccp4/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/libccp4/work/.cache HOME=/wrkdirs/usr/ports/science/libccp4/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/libccp4/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/libccp4/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288 --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran14" F90="gfortran14" FC="gfortran14" FFLAGS="-O -fPIC -std=legacy -Wl,-rpath=/usr/local/lib/gcc14" F90FLAGS="-O -fPIC -std=legacy -Wl,-rpath=/usr/local/lib/gcc14" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc14" XDG_DATA_HOME=/wrkdirs/usr/ports/science/libccp4/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/libccp4/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/libccp4/work/.cache HOME=/wrkdirs/usr/ports/science/libccp4/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/libccp4/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/libccp4/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc14 -L/usr/local/lib/gcc14 -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=15.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/libccp4" EXAMPLESDIR="share/examples/libccp4" DATADIR="share/libccp4" WWWDIR="www/libccp4" ETCDIR="etc/libccp4" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/libccp4 DOCSDIR=/usr/local/share/doc/libccp4 EXAMPLESDIR=/usr/local/share/examples/libccp4 WWWDIR=/usr/local/www/libccp4 ETCDIR=/usr/local/etc/libccp4 --End SUB_LIST-- ---Begin make.conf--- DEFAULT_VERSIONS+=pgsql=15 DEFAULT_VERSIONS+=php=82 DISABLE_LICENSES=yes SELECTED_OPTIONS+=OPENBLAS ARCHDEF=AMD64K10h64SSE3 USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### DEFAULT_VERSIONS+=pgsql=15 DEFAULT_VERSIONS+=php=82 DISABLE_LICENSES=yes SELECTED_OPTIONS+=OPENBLAS ARCHDEF=AMD64K10h64SSE3 WITH_CCACHE_BUILD=yes CCACHE_DIR=/root/.ccache #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> libccp4-8.0.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.6.2.pkg [pkg.DaveG.ca] Installing pkg-2.6.2... [pkg.DaveG.ca] Extracting pkg-2.6.2: .......... done ===> libccp4-8.0.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of libccp4-8.0.0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by libccp4-8.0.0 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by libccp4-8.0.0 for building => SHA256 Checksum OK for libccp4-8.0.0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by libccp4-8.0.0 for building ===> Extracting for libccp4-8.0.0 => SHA256 Checksum OK for libccp4-8.0.0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for libccp4-8.0.0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> libccp4-8.0.0 depends on executable: gfortran14 - not found ===> Installing existing package /packages/All/gcc14-14.2.0_4.pkg [pkg.DaveG.ca] Installing gcc14-14.2.0_4... [pkg.DaveG.ca] `-- Installing binutils-2.44,1... [pkg.DaveG.ca] | `-- Installing indexinfo-0.3.1_1... [pkg.DaveG.ca] | `-- Extracting indexinfo-0.3.1_1: . done [pkg.DaveG.ca] | `-- Installing zstd-1.5.7_1... [pkg.DaveG.ca] | `-- Extracting zstd-1.5.7_1: .......... done [pkg.DaveG.ca] `-- Extracting binutils-2.44,1: .......... done [pkg.DaveG.ca] `-- Installing gmp-6.3.0... [pkg.DaveG.ca] `-- Extracting gmp-6.3.0: .......... done [pkg.DaveG.ca] `-- Installing mpc-1.3.1_1... [pkg.DaveG.ca] | `-- Installing mpfr-4.2.2,1... [pkg.DaveG.ca] | `-- Extracting mpfr-4.2.2,1: .......... done [pkg.DaveG.ca] `-- Extracting mpc-1.3.1_1: ...... done [pkg.DaveG.ca] Extracting gcc14-14.2.0_4: .......... done ===== Message from gcc14-14.2.0_4: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc14 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> libccp4-8.0.0 depends on executable: gfortran14 - found ===> Returning to build of libccp4-8.0.0 ===> libccp4-8.0.0 depends on package: gmake>=4.4.1 - not found ===> Installing existing package /packages/All/gmake-4.4.1.pkg [pkg.DaveG.ca] Installing gmake-4.4.1... [pkg.DaveG.ca] `-- Installing gettext-runtime-0.26... [pkg.DaveG.ca] `-- Extracting gettext-runtime-0.26: .......... done [pkg.DaveG.ca] Extracting gmake-4.4.1: .......... done ===> libccp4-8.0.0 depends on package: gmake>=4.4.1 - found ===> Returning to build of libccp4-8.0.0 ===> libccp4-8.0.0 depends on file: /usr/local/bin/as - found ===> libccp4-8.0.0 depends on file: /usr/local/bin/ccache - not found ===> Installing existing package /packages/All/ccache-3.7.12_8.pkg [pkg.DaveG.ca] Installing ccache-3.7.12_8... [pkg.DaveG.ca] Extracting ccache-3.7.12_8: ......... done Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc14 create symlink for gcc14 (world) create symlink for g++14 create symlink for g++14 (world) create symlink for cpp14 create symlink for cpp14 (world) create symlink for clang create symlink for clang (world) create symlink for clang++ create symlink for clang++ (world) ===== Message from ccache-3.7.12_8: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. ===> libccp4-8.0.0 depends on file: /usr/local/bin/ccache - found ===> Returning to build of libccp4-8.0.0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> libccp4-8.0.0 depends on shared library: libmmdb2.so - not found ===> Installing existing package /packages/All/mmdb2-2.0.22.pkg [pkg.DaveG.ca] Installing mmdb2-2.0.22... [pkg.DaveG.ca] Extracting mmdb2-2.0.22: .......... done ===> libccp4-8.0.0 depends on shared library: libmmdb2.so - found (/usr/local/lib/libmmdb2.so) ===> Returning to build of libccp4-8.0.0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for libccp4-8.0.0 configure: loading site script /usr/ports/Templates/config.site checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) /usr/bin/awk checking whether /usr/local/bin/gmake sets $(MAKE)... yes checking whether /usr/local/bin/gmake supports nested variables... yes checking for style of include used by /usr/local/bin/gmake... GNU checking for gcc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking dependency style of cc... gcc3 checking the archiver (/usr/local/bin/ar) interface... ar checking build system type... amd64-portbld-freebsd15.0 checking host system type... amd64-portbld-freebsd15.0 checking how to print strings... printf checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/egrep checking for fgrep... (cached) /usr/bin/fgrep checking for ld used by cc... /usr/local/bin/ld checking if the linker (/usr/local/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm checking the name lister (/usr/local/bin/nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 524288 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... no checking how to convert amd64-portbld-freebsd15.0 file names to amd64-portbld-freebsd15.0 format... func_convert_file_noop checking how to convert amd64-portbld-freebsd15.0 file names to toolchain format... func_convert_file_noop checking for /usr/local/bin/ld option to reload object files... -r checking for objdump... /usr/local/bin/objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... /usr/local/bin/ranlib checking command to parse /usr/local/bin/nm output from cc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... cpp checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... .libs checking if cc supports -fno-rtti -fno-exceptions... yes checking for cc option to produce PIC... -fPIC -DPIC checking if cc PIC flag -fPIC -DPIC works... yes checking if cc static flag -static works... yes checking if cc supports -c -o file.o... yes checking if cc supports -c -o file.o... (cached) yes checking whether the cc linker (/usr/local/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... freebsd15.0 ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gcc... (cached) cc checking whether we are using the GNU C compiler... (cached) yes checking whether cc accepts -g... (cached) yes checking for cc option to accept ISO C89... (cached) none needed checking dependency style of cc... (cached) gcc3 checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking dependency style of c++... gcc3 checking how to run the C++ preprocessor... c++ -E checking for ld used by c++... /usr/local/bin/ld checking if the linker (/usr/local/bin/ld) is GNU ld... yes checking whether the c++ linker (/usr/local/bin/ld) supports shared libraries... yes checking for c++ option to produce PIC... -fPIC -DPIC checking if c++ PIC flag -fPIC -DPIC works... yes checking if c++ static flag -static works... yes checking if c++ supports -c -o file.o... yes checking if c++ supports -c -o file.o... (cached) yes checking whether the c++ linker (/usr/local/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... host os freebsd15.0 c++ freebsd15.0 ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran14 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran14 option to produce PIC... -fPIC checking if gfortran14 PIC flag -fPIC works... yes checking if gfortran14 static flag -static works... yes checking if gfortran14 supports -c -o file.o... yes checking if gfortran14 supports -c -o file.o... (cached) yes checking whether the gfortran14 linker (/usr/local/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... freebsd15.0 ld.so checking how to hardcode library paths into programs... immediate checking for m4... /usr/bin/m4 configure: fortran/unix.m4 will be processed with m4 checking for library containing cos... -lm checking for MMDB_CCIF_Init in -lmmdb2... yes checking whether Fortran 77 compiler accepts -fallow-argument-mismatch... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating ccp4c.pc config.status: creating ccp4f.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands /usr/bin/sed -i.bak -e 's| -Wl,--as-needed||; s| -Wl,--no-as-needed||' /wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0/Makefile /usr/bin/sed -i.bak -e 's|^archive_cmds=|wl="-Wl,"; archive_cmds=|' /wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0/libtool # wl is missing otherwise for some reason =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for libccp4-8.0.0 m4 fortran/unix.m4 > fortran/unix.f /usr/local/bin/gmake all-am gmake[1]: Entering directory '/wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0' /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./ccp4 -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT fortran/fortran_libccp4f_la-ccp4_diskio_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_diskio_f.Tpo -c -o fortran/fortran_libccp4f_la-ccp4_diskio_f.lo `test -f 'fortran/ccp4_diskio_f.c' || echo './'`fortran/ccp4_diskio_f.c /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./ccp4 -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT fortran/fortran_libccp4f_la-ccp4_parser_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_parser_f.Tpo -c -o fortran/fortran_libccp4f_la-ccp4_parser_f.lo `test -f 'fortran/ccp4_parser_f.c' || echo './'`fortran/ccp4_parser_f.c /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./ccp4 -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT fortran/fortran_libccp4f_la-cmaplib_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-cmaplib_f.Tpo -c -o fortran/fortran_libccp4f_la-cmaplib_f.lo `test -f 'fortran/cmaplib_f.c' || echo './'`fortran/cmaplib_f.c /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./ccp4 -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT fortran/fortran_libccp4f_la-csymlib_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-csymlib_f.Tpo -c -o fortran/fortran_libccp4f_la-csymlib_f.lo `test -f 'fortran/csymlib_f.c' || echo './'`fortran/csymlib_f.c /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./ccp4 -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT fortran/fortran_libccp4f_la-ccp4_general_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_general_f.Tpo -c -o fortran/fortran_libccp4f_la-ccp4_general_f.lo `test -f 'fortran/ccp4_general_f.c' || echo './'`fortran/ccp4_general_f.c /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./ccp4 -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT fortran/fortran_libccp4f_la-ccp4_unitcell_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-ccp4_unitcell_f.Tpo -c -o fortran/fortran_libccp4f_la-ccp4_unitcell_f.lo `test -f 'fortran/ccp4_unitcell_f.c' || echo './'`fortran/ccp4_unitcell_f.c /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./ccp4 -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT fortran/fortran_libccp4f_la-cmtzlib_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-cmtzlib_f.Tpo -c -o fortran/fortran_libccp4f_la-cmtzlib_f.lo `test -f 'fortran/cmtzlib_f.c' || echo './'`fortran/cmtzlib_f.c /bin/sh ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./ccp4 -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT fortran/fortran_libccp4f_la-library_f.lo -MD -MP -MF fortran/.deps/fortran_libccp4f_la-library_f.Tpo -c -o fortran/fortran_libccp4f_la-library_f.lo `test -f 'fortran/library_f.c' || echo './'`fortran/library_f.c /bin/sh ./libtool --tag=F77 --mode=compile gfortran14 -fno-second-underscore -fallow-argument-mismatch -c -o fortran/ccplib.lo fortran/ccplib.f /bin/sh 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fortran/fftlib.f -fPIC -o fortran/.libs/fftlib.o libtool: compile: gfortran14 -fno-second-underscore -fallow-argument-mismatch -c fortran/sorting_main.f -fPIC -o fortran/.libs/sorting_main.o libtool: compile: gfortran14 -fno-second-underscore -fallow-argument-mismatch -c fortran/ccplib.f -fPIC -o fortran/.libs/ccplib.o libtool: compile: gfortran14 -fno-second-underscore -fallow-argument-mismatch -c fortran/keyparse.f -fPIC -o fortran/.libs/keyparse.o libtool: compile: gfortran14 -fno-second-underscore -fallow-argument-mismatch -c fortran/libhtml.f -fPIC -o fortran/.libs/libhtml.o libtool: compile: gfortran14 -fno-second-underscore -fallow-argument-mismatch -c fortran/modlib.f -fPIC -o fortran/.libs/modlib.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/ccp4_array.lo -MD -MP -MF ccp4/.deps/ccp4_array.Tpo -c ccp4/ccp4_array.c -fPIC -DPIC -o ccp4/.libs/ccp4_array.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/cmtzlib.lo -MD -MP -MF ccp4/.deps/cmtzlib.Tpo -c ccp4/cmtzlib.c -fPIC -DPIC -o ccp4/.libs/cmtzlib.o libtool: compile: gfortran14 -fno-second-underscore -fallow-argument-mismatch -c fortran/rwbrook.f -fPIC -o fortran/.libs/rwbrook.o libtool: compile: gfortran14 -fno-second-underscore -fallow-argument-mismatch -c fortran/parser.f -fPIC -o fortran/.libs/parser.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/cmap_data.lo -MD -MP -MF ccp4/.deps/cmap_data.Tpo -c ccp4/cmap_data.c -fPIC -DPIC -o ccp4/.libs/cmap_data.o libtool: compile: gfortran14 -fno-second-underscore -fallow-argument-mismatch -c fortran/dna_output.f -fPIC -o fortran/.libs/dna_output.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/csymlib.lo -MD -MP -MF ccp4/.deps/csymlib.Tpo -c ccp4/csymlib.c -fPIC -DPIC -o ccp4/.libs/csymlib.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/ccp4_parser.lo -MD -MP -MF ccp4/.deps/ccp4_parser.Tpo -c ccp4/ccp4_parser.c -fPIC -DPIC -o ccp4/.libs/ccp4_parser.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/ccp4_general.lo -MD -MP -MF ccp4/.deps/ccp4_general.Tpo -c ccp4/ccp4_general.c -fPIC -DPIC -o ccp4/.libs/ccp4_general.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/ccp4_program.lo -MD -MP -MF ccp4/.deps/ccp4_program.Tpo -c ccp4/ccp4_program.c -fPIC -DPIC -o ccp4/.libs/ccp4_program.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/cmap_header.lo -MD -MP -MF ccp4/.deps/cmap_header.Tpo -c ccp4/cmap_header.c -fPIC -DPIC -o ccp4/.libs/cmap_header.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/cmap_labels.lo -MD -MP -MF ccp4/.deps/cmap_labels.Tpo -c ccp4/cmap_labels.c -fPIC -DPIC -o ccp4/.libs/cmap_labels.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/cvecmat.lo -MD -MP -MF ccp4/.deps/cvecmat.Tpo -c ccp4/cvecmat.c -fPIC -DPIC -o ccp4/.libs/cvecmat.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/cmap_accessor.lo -MD -MP -MF ccp4/.deps/cmap_accessor.Tpo -c ccp4/cmap_accessor.c -fPIC -DPIC -o ccp4/.libs/cmap_accessor.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/cmap_open.lo -MD -MP -MF ccp4/.deps/cmap_open.Tpo -c ccp4/cmap_open.c -fPIC -DPIC -o ccp4/.libs/cmap_open.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/ccp4_unitcell.lo -MD -MP -MF ccp4/.deps/ccp4_unitcell.Tpo -c ccp4/ccp4_unitcell.c -fPIC -DPIC -o ccp4/.libs/ccp4_unitcell.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/cmap_skew.lo -MD -MP -MF ccp4/.deps/cmap_skew.Tpo -c ccp4/cmap_skew.c -fPIC -DPIC -o ccp4/.libs/cmap_skew.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/library_file.lo -MD -MP -MF ccp4/.deps/library_file.Tpo -c ccp4/library_file.c -fPIC -DPIC -o ccp4/.libs/library_file.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/library_utils.lo -MD -MP -MF ccp4/.deps/library_utils.Tpo -c ccp4/library_utils.c -fPIC -DPIC -o ccp4/.libs/library_utils.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/library_err.lo -MD -MP -MF ccp4/.deps/library_err.Tpo -c ccp4/library_err.c -fPIC -DPIC -o ccp4/.libs/library_err.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/cmap_stats.lo -MD -MP -MF ccp4/.deps/cmap_stats.Tpo -c ccp4/cmap_stats.c -fPIC -DPIC -o ccp4/.libs/cmap_stats.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/cmap_symop.lo -MD -MP -MF ccp4/.deps/cmap_symop.Tpo -c ccp4/cmap_symop.c -fPIC -DPIC -o ccp4/.libs/cmap_symop.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/cmap_close.lo -MD -MP -MF ccp4/.deps/cmap_close.Tpo -c ccp4/cmap_close.c -fPIC -DPIC -o ccp4/.libs/cmap_close.o libtool: compile: cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT ccp4/pack_c.lo -MD -MP -MF ccp4/.deps/pack_c.Tpo -c ccp4/pack_c.c -fPIC -DPIC -o ccp4/.libs/pack_c.o fortran/modlib.f:256:72: 256 | DO 100 I = 1, P | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) fortran/modlib.f:258:72: 258 | DO 100 K = 1, R | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) fortran/modlib.f:259:72: 259 | DO 100 J = 1, Q | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1) fortran/modlib.f:263:72: 263 | 100 D(I,L) = D(I,L) + A(I,J) * B(J,K) * C(K,L) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1) fortran/lgglib.f:43:72: 43 | 10 A(I)=CELL(I)*V(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:51:72: 51 | DO 10 IJ=1,IN | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:52:72: 52 | 10 A(IJ,II)=A1(II,IJ) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:60:72: 60 | DO 10 IJ=1,IN | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:61:72: 61 | 10 OUT(II,IJ)=A1(II,IJ)+A2(II,IJ) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/pack_f.f:109:28: 45 | call pack_wordimage_f(data, x, y, filnarray) | 2 ...... 109 | call pack_wordimage_f(data, x, y, filnarray) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/INTEGER(2)). fortran/pack_f.f:141:30: 77 | call v2pack_wordimage_f(data, x, y, filnarray) | 2 ...... 141 | call v2pack_wordimage_f(data, x, y, filnarray) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/INTEGER(2)). fortran/lgglib.f:80:72: 80 | 20 V(I1)=A(I,I1) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) fortran/plotsubs.f:312:72: 312 | 1 CALL PLTDWU(X(I),Y(I)) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) fortran/lgglib.f:90:72: 90 | 20 VJ(I1)=A(I1,IJ) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) fortran/lgglib.f:99:72: 99 | DO 10 I2=1,IN | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:100:72: 100 | 10 A(I1,I2)=A1(I1,I2)*C | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/plotsubs.f:352:72: 352 | IF(J) 26,26,27 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:115:72: 115 | 40 RSLT(I,IJ)=POIMULT(IN1,IM2,V1,V2) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1) fortran/plotsubs.f:377:72: 377 | IF(J) 30,28,20 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:123:72: 123 | DO 10 IJ=1,IN | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:124:72: 124 | 10 OUT(II,IJ)=A1(II,IJ)-A2(II,IJ) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:280:72: 280 | DO 20 IC=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) fortran/lgglib.f:281:72: 281 | 20 SYM(IC,4,IS)=SYM(IC,4,IS)*CELL(IC) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) fortran/modlib.f:749:72: 749 | IF (M-2) 30,10,20 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/ccplib.f:1039:72: 1039 | 10 IARR1(J)=IARR2(J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/ccplib.f:1064:72: 1064 | 10 ARR1(J)=ARR2(J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:668:72: 668 | 10 DOSQ = DOSQ + V(I)*V(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/rwbrook.f:1633:72: 1633 | DO 10 J=1,4 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/rwbrook.f:1651:72: 1651 | DO 20 J=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) fortran/fftlib.f:1252:72: 1252 | IF (K-I) 90,130,100 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/ccplib.f:1834:72: 1834 | 10 ARR1(J)=0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/ccplib.f:1856:72: 1856 | 10 IARR1(J)=0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/ccplib.f:1879:72: 1879 | 10 ARR1(J)=0.0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/rwbrook.f:2314:72: 2314 | DO 10 J=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/rwbrook.f:2320:72: 2320 | DO 20 J=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) fortran/rwbrook.f:2374:72: 2374 | 1 CELLD(I) = CELL(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) fortran/rwbrook.f:2410:72: 2410 | 1 RCEL(I) = CELLAS(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) fortran/lgglib.f:1766:72: 1766 | DO 10 I2=1,IN | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:1767:72: 1767 | 10 A(I1,I2)=A1(I1,I2)*C | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/modlib.f:1386:18: 1383 | DO 20 J = 2,M | 2 ...... 1386 | A(I,J) = A(J,I) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/modlib.f:1388:16: 1383 | DO 20 J = 2,M | 2 ...... 1388 | ALPHA(J) = A(J,J) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/modlib.f:1388:25: 1383 | DO 20 J = 2,M | 2 ...... 1388 | ALPHA(J) = A(J,J) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/modlib.f:1441:20: 1440 | DO 120 I = 2,M | 2 1441 | H = ALPHA(I) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/modlib.f:1442:16: 1440 | DO 120 I = 2,M | 2 1441 | H = ALPHA(I) 1442 | ALPHA(I) = A(I,I) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/modlib.f:1442:25: 1440 | DO 120 I = 2,M | 2 1441 | H = ALPHA(I) 1442 | ALPHA(I) = A(I,I) | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/modlib.f:1443:14: 1440 | DO 120 I = 2,M | 2 ...... 1443 | A(I,I) = H | 1 Warning: Array reference at (1) out of bounds (2 > 1) in loop beginning at (2) fortran/rwbrook.f:2817:72: 2817 | DO 40 J = 1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 40 at (1) fortran/lgglib.f:1912:72: 1912 | 10 ME(J)=J | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:1934:72: 1934 | 40 A(I,J) = A(I,J)*Y | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1) fortran/lgglib.f:1957:72: 1957 | 66 A(K,J) = W | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 66 at (1) fortran/lgglib.f:1980:72: 1980 | 1 IF (TH(I).GT.180.) TH(I) = TH(I) - 360. | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) fortran/lgglib.f:2106:72: 2106 | DO 50 J = 1, N | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 50 at (1) fortran/lgglib.f:2107:72: 2107 | 50 DETA(I) = DETA(I) + ATA(I,J)*PHI(J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1) fortran/lgglib.f:2116:72: 2116 | DO 10 J = I,N | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:2117:72: 2117 | DO 10 K = 1,M | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) fortran/lgglib.f:2118:72: 2118 | 10 ATA(I,J) = ATA(I,J) + A(K,I)*A(K,J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:2121:72: 2121 | DO 20 J = 1, I-1 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1) fortran/lgglib.f:2122:72: 2122 | 20 ATA(I,J) = ATA(J,I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1) fortran/lgglib.f:2136:72: 2136 | 30 B1(I) = POIMULT(M, M, A(1,I), PHI) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1) fortran/lgglib.f:2146:72: 2146 | DO 40 J = 1, N | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 40 at (1) fortran/lgglib.f:2147:72: 2147 | 40 DETA(I) = DETA(I) + ATA(I,J)*B1(J) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1) fortran/lgglib.f:2239:72: 2239 | DO 4 I=1,3 | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 4 at (1) fortran/lgglib.f:2240:72: 2240 | 4 S(I,J) = 0.0 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 4 at (1) fortran/lgglib.f:2266:72: 2266 | IF(IFIELD-3) 104,104,103 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2268:72: 2268 | 103 IF(ICOL-ICOLMX) 9987,1000,1000 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2274:72: 2274 | IF (11-IFNUM) 9980,110,110 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2276:72: 2276 | 110 IF (10-IFNUM) 118,115,112 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2278:72: 2278 | 112 IF (6-IFNUM) 125,130,130 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2286:72: 2286 | IF (IFNUM-9) 122,122,9980 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2287:72: 2287 | 122 IF (IFNUM-6) 130,130,125 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2303:72: 2303 | IF (IFNUM-6) 138,138,9980 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2314:72: 2314 | IF(ICOL - ICOLMX) 151,151,1000 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2321:72: 2321 | 163 IF (ICOLMX+1-ICOL) 9980,1000,9980 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2330:72: 2330 | IF(ABS(ABS(D) - 1.0) -.0001) 1001,9985,9985 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:2332:72: 2332 | IF(IFIELD - 3) 9987,1002,9987 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) fortran/lgglib.f:3222:72: 3222 | 10 POIMULT=V1(I)*V2(I)+POIMULT | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:4072:72: 4072 | DO 5 J = 1, NATM | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 5 at (1) fortran/lgglib.f:4073:72: 4073 | 5 CALL ARRGIVE(3,EMT(1,I),VT((J-1)*3+1,I+3)) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 5 at (1) fortran/lgglib.f:5842:72: 5842 | 10 C=C+V(I)*V(I) | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1) fortran/lgglib.f:1315:72: 1315 | 1 , (X(I,NATM),I=1,3) | 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1369:72: 1369 | 1 , (X(I,NATM),I=1,3),occ(natm),bfac(natm) | 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1429:72: 1429 | 1 , (X(I,NATM),I=1,3),occ(natm),bfac(natm) | 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1489:72: 1489 | 1 res(natm), (X(I,NATM),I=1,3),occ(natm),bfac(natm) | 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1546:72: 1546 | 1 , (X(I,NATM),I=1,3) | 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:1598:72: 1598 | 1 SEQ(NATM), RES(NATM), ATOM(NATM) | 1 Warning: Branch at (1) may result in an infinite loop fortran/lgglib.f:2424:10: 2423 | do j = 1, 4 | 2 2424 | rt(j,4) = gt(4,j) | 1 Warning: Array reference at (1) out of bounds (4 > 3) in loop beginning at (2) fortran/lgglib.f:1239:72: 1239 | CALL matmult(3,3,3,1,ORTH,B3,XYZ,B1) | 1 Warning: More actual than formal arguments in procedure call at (1) fortran/lgglib.f:1277:72: 1277 | CALL matmult(3,3,3,1,ORTH,B3,XYZ,B1) | 1 Warning: More actual than formal arguments in procedure call at (1) mv -f fortran/.deps/fortran_libccp4f_la-ccp4_parser_f.Tpo fortran/.deps/fortran_libccp4f_la-ccp4_parser_f.Plo ccp4/library_err.c:247:29: warning: comparing a pointer to a null character constant; did you mean to compare to NULL? [-Wpointer-compare] 247 | if (msg == NULL || msg == '\0') colon = ""; | ^~~~ | (void *)0 1 warning generated. mv -f fortran/.deps/fortran_libccp4f_la-ccp4_unitcell_f.Tpo fortran/.deps/fortran_libccp4f_la-ccp4_unitcell_f.Plo fortran/ccp4_general_f.c:123:10: warning: call to undeclared function 'iargc_'; ISO C99 and later do not support implicit function declarations [-Wimplicit-function-declaration] 123 | argc = FORTRAN_CALL (IARGC, iargc, (), (), ()) + 1; | ^ ./ccp4/ccp4_fortran.h:192:5: note: expanded from macro 'FORTRAN_CALL' 192 | name##_ p_sun | ^ :119:1: note: expanded from here 119 | iargc_ | ^ fortran/ccp4_general_f.c:135:5: warning: call to undeclared function 'getarg_'; ISO C99 and later do not support implicit function declarations [-Wimplicit-function-declaration] 135 | FORTRAN_CALL (GETARG, getarg, (&i,arg,arg_len), (&i,arg), (&i,arg,arg_len)); | ^ ./ccp4/ccp4_fortran.h:192:5: note: expanded from macro 'FORTRAN_CALL' 192 | name##_ p_sun | ^ :120:1: note: expanded from here 120 | getarg_ | ^ 2 warnings generated. fortran/library_f.c:306:16: warning: passing arguments to a function without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 306 | (* routne) (leng[1], pointer[1]); | ^ fortran/library_f.c:309:16: warning: passing arguments to a function without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 309 | (* routne) (leng[1], pointer[1], leng[2], pointer[2]); | ^ fortran/library_f.c:312:16: warning: passing arguments to a function without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 312 | (* routne) (leng[1], pointer[1], leng[2], pointer[2], | ^ fortran/library_f.c:316:16: warning: passing arguments to a function without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 316 | (* routne) (leng[1], pointer[1], leng[2], pointer[2], | ^ fortran/library_f.c:320:16: warning: passing arguments to a function without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 320 | (* routne) (leng[1], pointer[1], leng[2], pointer[2], | ^ fortran/library_f.c:325:16: warning: passing arguments to a function without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 325 | (* routne) (leng[1], pointer[1], leng[2], pointer[2], | ^ fortran/library_f.c:330:16: warning: passing arguments to a function without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 330 | (* routne) (leng[1], pointer[1], leng[2], pointer[2], | ^ fortran/library_f.c:336:16: warning: passing arguments to a function without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 336 | (* routne) (leng[1], pointer[1], leng[2], pointer[2], | ^ fortran/library_f.c:342:16: warning: passing arguments to a function without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 342 | (* routne) (leng[1], pointer[1], leng[2], pointer[2], | ^ fortran/library_f.c:349:16: warning: passing arguments to a function without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 349 | (* routne) (leng[1], pointer[1], leng[2], pointer[2], | ^ fortran/library_f.c:356:16: warning: passing arguments to a function without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 356 | (* routne) (leng[1], pointer[1], leng[2], pointer[2], | ^ fortran/library_f.c:364:16: warning: passing arguments to a function without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 364 | (* routne) (leng[1], pointer[1], leng[2], pointer[2], | ^ 12 warnings generated. mv -f fortran/.deps/fortran_libccp4f_la-ccp4_general_f.Tpo fortran/.deps/fortran_libccp4f_la-ccp4_general_f.Plo mv -f fortran/.deps/fortran_libccp4f_la-library_f.Tpo fortran/.deps/fortran_libccp4f_la-library_f.Plo ccp4/library_utils.c:152:18: warning: passing arguments to 'putenv' without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 152 | return (putenv (param)); | ^ ccp4/library_utils.c:182:10: warning: call to undeclared function 'setlinebuf'; ISO C99 and later do not support implicit function declarations [-Wimplicit-function-declaration] 182 | return setlinebuf(stdout); | ^ 2 warnings generated. fortran/plot84lib.f:6390:25: 6390 | CALL QWRITE(IUNITR,IREC,NRECL) | 1 ...... 12406 | CALL QWRITE(IUNIT,NBYTES,1) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). fortran/plot84lib.f:6473:24: 6449 | CALL QREAD(IUNITR,IREC,NRECL,IER) | 2 ...... 6473 | CALL QREAD(IUNITR,JJXY,4,IER) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/REAL(4)). fortran/plot84lib.f:8301:22: 8301 | CALL AXIS(X,Y,HTEXT,NCHAR,AXLEN,ANGLE,FVAL,DV) | 1 Warning: Rank mismatch in argument 'label' at (1) (scalar and rank-1) fortran/plot84lib.f:10427:19: 10427 | CALL TRIPLOT(ICLEAR,1) | 1 Warning: Rank mismatch in argument 'line' at (1) (rank-1 and scalar) mv -f fortran/.deps/fortran_libccp4f_la-ccp4_diskio_f.Tpo fortran/.deps/fortran_libccp4f_la-ccp4_diskio_f.Plo fortran/csymlib_f.c:1102:21: warning: address of array 'spacegroup->symbol_old' will always evaluate to 'true' [-Wpointer-bool-conversion] 1102 | if (spacegroup->symbol_old) { | ~~ ~~~~~~~~~~~~^~~~~~~~~~ 1 warning generated. mv -f fortran/.deps/fortran_libccp4f_la-csymlib_f.Tpo fortran/.deps/fortran_libccp4f_la-csymlib_f.Plo ccp4/pack_c.c:1391:9: warning: a function definition without a prototype is deprecated in all versions of C and is not supported in C23 [-Wdeprecated-non-prototype] 1391 | char *long_to_char(lng, string) | ^ 1 warning generated. mv -f fortran/.deps/fortran_libccp4f_la-cmaplib_f.Tpo fortran/.deps/fortran_libccp4f_la-cmaplib_f.Plo fortran/cmtzlib_f.c:279:43: warning: incompatible pointer types passing 'fpstr' (aka 'char *') to parameter of type 'char (*)[80]' [-Wincompatible-pointer-types] 279 | *nlines = ccp4_lrhist(mtzdata[*mindx-1], hstrng, *nlines); | ^~~~~~ ./ccp4/cmtzlib.h:668:38: note: passing argument to parameter 'history' here 668 | int ccp4_lrhist(const MTZ *mtz, char history[][MTZRECORDLENGTH], int nlines); | ^ fortran/cmtzlib_f.c:636:31: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[31]' [-Wincompatible-pointer-types] 636 | if (MtzParseLabin(temp_name,label,*nlprgi,user_label_in[*mindx-1]) == -1) | ^~~~~ ./ccp4/cmtzlib.h:738:48: note: passing argument to parameter 'prog_labels' here 738 | int MtzParseLabin(char *labin_line, const char prog_labels[][31], | ^ fortran/cmtzlib_f.c:690:31: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[31]' [-Wincompatible-pointer-types] 690 | if (MtzParseLabin(temp_name,label,*nlprgo,user_label_out[*mindx-1]) == -1) | ^~~~~ ./ccp4/cmtzlib.h:738:48: note: passing argument to parameter 'prog_labels' here 738 | int MtzParseLabin(char *labin_line, const char prog_labels[][31], | ^ fortran/cmtzlib_f.c:735:31: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[31]' [-Wincompatible-pointer-types] 735 | if (MtzParseLabin(temp_name,label,*nlprgi,user_lab) == -1) | ^~~~~ ./ccp4/cmtzlib.h:738:48: note: passing argument to parameter 'prog_labels' here 738 | int MtzParseLabin(char *labin_line, const char prog_labels[][31], | ^ fortran/cmtzlib_f.c:735:45: warning: incompatible pointer types passing 'char *' to parameter of type 'char (*)[2][31]' [-Wincompatible-pointer-types] 735 | if (MtzParseLabin(temp_name,label,*nlprgi,user_lab) == -1) | ^~~~~~~~ ./ccp4/cmtzlib.h:739:28: note: passing argument to parameter 'user_labels' here 739 | const int nlprgi, char user_labels[][2][31]); | ^ fortran/cmtzlib_f.c:834:44: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[31]' [-Wincompatible-pointer-types] 834 | colarray = ccp4_lrassn(mtzdata[*mindx-1],label,*nlprgi,type); | ^~~~~ ./ccp4/cmtzlib.h:754:49: note: passing argument to parameter 'labels' here 754 | MTZCOL **ccp4_lrassn(const MTZ *mtz, const char labels[][31], const int nlabels, | ^ fortran/cmtzlib_f.c:834:58: warning: incompatible pointer types passing 'char *' to parameter of type 'char (*)[3]' [-Wincompatible-pointer-types] 834 | colarray = ccp4_lrassn(mtzdata[*mindx-1],label,*nlprgi,type); | ^~~~ ./ccp4/cmtzlib.h:755:8: note: passing argument to parameter 'types' here 755 | char types[][3]); | ^ fortran/cmtzlib_f.c:1214:14: warning: passing 'MTZCOL *[10000]' to parameter of type 'const MTZCOL **' discards qualifiers in nested pointer types [-Wincompatible-pointer-types-discards-qualifiers] 1214 | collookup[mindex-1], ndatmss[mindex-1], irref[mindex-1]); | ^~~~~~~~~~~~~~~~~~~ ./ccp4/cmtzlib.h:808:17: note: passing argument to parameter 'lookup' here 808 | const MTZCOL *lookup[], const int ncols, const int iref); | ^ fortran/cmtzlib_f.c:1811:35: warning: incompatible pointer types passing 'fpstr' (aka 'char *') to parameter of type 'const char (*)[80]' [-Wincompatible-pointer-types] 1811 | MtzAddHistory(mtzdata[*mindx-1], hstrng, *nlines); | ^~~~~~ ./ccp4/cmtzlib.h:875:40: note: passing argument to parameter 'history' here 875 | int MtzAddHistory(MTZ *mtz, const char history[][MTZRECORDLENGTH], const int nlines); | ^ fortran/cmtzlib_f.c:1863:35: warning: incompatible pointer types passing 'char[80]' to parameter of type 'const char (*)[80]'; take the address with & [-Wincompatible-pointer-types] 1863 | MtzAddHistory(mtzdata[*mindx-1], hline, 1); | ^~~~~ | & ./ccp4/cmtzlib.h:875:40: note: passing argument to parameter 'history' here 875 | int MtzAddHistory(MTZ *mtz, const char history[][MTZRECORDLENGTH], const int nlines); | ^ fortran/cmtzlib_f.c:2436:46: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[31]' [-Wincompatible-pointer-types] 2436 | colarray = ccp4_lwassn(mtzdata[*mindx-1],label,*nlprgo,type,*iappnd); | ^~~~~ ./ccp4/cmtzlib.h:935:43: note: passing argument to parameter 'labels' here 935 | MTZCOL **ccp4_lwassn(MTZ *mtz, const char labels[][31], const int nlabels, | ^ fortran/cmtzlib_f.c:2436:60: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[3]' [-Wincompatible-pointer-types] 2436 | colarray = ccp4_lwassn(mtzdata[*mindx-1],label,*nlprgo,type,*iappnd); | ^~~~ ./ccp4/cmtzlib.h:936:25: note: passing argument to parameter 'types' here 936 | const char types[][3], const int iappnd); | ^ fortran/cmtzlib_f.c:2514:44: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[31]' [-Wincompatible-pointer-types] 2514 | colarray = ccp4_lwassn(mtzdata[*mindx-1],label,*nlprgo,type,*iappnd); | ^~~~~ ./ccp4/cmtzlib.h:935:43: note: passing argument to parameter 'labels' here 935 | MTZCOL **ccp4_lwassn(MTZ *mtz, const char labels[][31], const int nlabels, | ^ fortran/cmtzlib_f.c:2514:58: warning: incompatible pointer types passing 'char *' to parameter of type 'const char (*)[3]' [-Wincompatible-pointer-types] 2514 | colarray = ccp4_lwassn(mtzdata[*mindx-1],label,*nlprgo,type,*iappnd); | ^~~~ ./ccp4/cmtzlib.h:936:25: note: passing argument to parameter 'types' here 936 | const char types[][3], const int iappnd); | ^ 14 warnings generated. mv -f fortran/.deps/fortran_libccp4f_la-cmtzlib_f.Tpo fortran/.deps/fortran_libccp4f_la-cmtzlib_f.Plo /bin/sh ./libtool --tag=CC --mode=link cc -O2 -pipe -fPIC -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -no-undefined -Wl,-rpath=/usr/local/lib/gcc14 -L/usr/local/lib/gcc14 -L/usr/local/lib -o ccp4/libccp4c.la -rpath /usr/local/lib ccp4/ccp4_array.lo ccp4/cmap_data.lo ccp4/cmtzlib.lo ccp4/ccp4_general.lo ccp4/cmap_header.lo ccp4/csymlib.lo ccp4/ccp4_parser.lo ccp4/cmap_labels.lo ccp4/cvecmat.lo ccp4/ccp4_program.lo ccp4/cmap_open.lo ccp4/library_err.lo ccp4/ccp4_unitcell.lo ccp4/cmap_skew.lo ccp4/library_file.lo ccp4/cmap_accessor.lo ccp4/cmap_stats.lo ccp4/library_utils.lo ccp4/cmap_close.lo ccp4/cmap_symop.lo ccp4/pack_c.lo -lm libtool: link: cc -shared -fPIC -DPIC ccp4/.libs/ccp4_array.o ccp4/.libs/cmap_data.o ccp4/.libs/cmtzlib.o ccp4/.libs/ccp4_general.o ccp4/.libs/cmap_header.o ccp4/.libs/csymlib.o ccp4/.libs/ccp4_parser.o ccp4/.libs/cmap_labels.o ccp4/.libs/cvecmat.o ccp4/.libs/ccp4_program.o ccp4/.libs/cmap_open.o ccp4/.libs/library_err.o ccp4/.libs/ccp4_unitcell.o ccp4/.libs/cmap_skew.o ccp4/.libs/library_file.o ccp4/.libs/cmap_accessor.o ccp4/.libs/cmap_stats.o ccp4/.libs/library_utils.o ccp4/.libs/cmap_close.o ccp4/.libs/cmap_symop.o ccp4/.libs/pack_c.o -L/usr/local/lib/gcc14 -L/usr/local/lib -lm -O2 -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc14 -Wl,-soname -Wl,libccp4c.so.0 -o ccp4/.libs/libccp4c.so.0.0.0 libtool: link: (cd "ccp4/.libs" && rm -f "libccp4c.so.0" && ln -s "libccp4c.so.0.0.0" "libccp4c.so.0") libtool: link: (cd "ccp4/.libs" && rm -f "libccp4c.so" && ln -s "libccp4c.so.0.0.0" "libccp4c.so") libtool: link: ( cd "ccp4/.libs" && rm -f "libccp4c.la" && ln -s "../libccp4c.la" "libccp4c.la" ) /bin/sh ./libtool --tag=F77 --mode=link gfortran14 -fno-second-underscore -fallow-argument-mismatch -no-undefined -Wl,-rpath=/usr/local/lib/gcc14 -L/usr/local/lib/gcc14 -L/usr/local/lib -o fortran/libccp4f.la -rpath /usr/local/lib fortran/fortran_libccp4f_la-ccp4_diskio_f.lo fortran/fortran_libccp4f_la-ccp4_parser_f.lo fortran/fortran_libccp4f_la-cmaplib_f.lo fortran/fortran_libccp4f_la-csymlib_f.lo fortran/fortran_libccp4f_la-ccp4_general_f.lo fortran/fortran_libccp4f_la-ccp4_unitcell_f.lo fortran/fortran_libccp4f_la-cmtzlib_f.lo fortran/fortran_libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb2 -lm libtool: link: gfortran14 -shared -fPIC fortran/.libs/fortran_libccp4f_la-ccp4_diskio_f.o fortran/.libs/fortran_libccp4f_la-ccp4_parser_f.o fortran/.libs/fortran_libccp4f_la-cmaplib_f.o fortran/.libs/fortran_libccp4f_la-csymlib_f.o fortran/.libs/fortran_libccp4f_la-ccp4_general_f.o fortran/.libs/fortran_libccp4f_la-ccp4_unitcell_f.o fortran/.libs/fortran_libccp4f_la-cmtzlib_f.o fortran/.libs/fortran_libccp4f_la-library_f.o fortran/.libs/ccplib.o fortran/.libs/fftlib.o fortran/.libs/modlib.o fortran/.libs/parser.o fortran/.libs/rwbrook.o fortran/.libs/libhtml.o fortran/.libs/keyparse.o fortran/.libs/dna_output.o fortran/.libs/pack_f.o fortran/.libs/pxxml.o fortran/.libs/lgglib.o fortran/.libs/plot84lib.o fortran/.libs/plotsubs.o fortran/.libs/sorting_main.o fortran/.libs/unix.o -Wl,-rpath -Wl,/wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0/ccp4/.libs -Wl,-rpath -Wl,/usr/local/lib -L/usr/local/lib/gcc14 -L/usr/local/lib ccp4/.libs/libccp4c.so -lmmdb2 -lm -Wl,-rpath=/usr/local/lib/gcc14 -Wl,-soname -Wl,libccp4f.so.0 -o fortran/.libs/libccp4f.so.0.0.0 libtool: link: (cd "fortran/.libs" && rm -f "libccp4f.so.0" && ln -s "libccp4f.so.0.0.0" "libccp4f.so.0") libtool: link: (cd "fortran/.libs" && rm -f "libccp4f.so" && ln -s "libccp4f.so.0.0.0" "libccp4f.so") libtool: link: ( cd "fortran/.libs" && rm -f "libccp4f.la" && ln -s "../libccp4f.la" "libccp4f.la" ) gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0' =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> libccp4-8.0.0 depends on executable: gfortran14 - found =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for libccp4-8.0.0 ===> Generating temporary packing list if test -z 'strip'; then \ /usr/local/bin/gmake INSTALL_PROGRAM="/bin/sh /wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0/build-aux/install-sh -c -s" \ install_sh_PROGRAM="/bin/sh /wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0/build-aux/install-sh -c -s" INSTALL_STRIP_FLAG=-s \ install; \ else \ /usr/local/bin/gmake INSTALL_PROGRAM="/bin/sh /wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0/build-aux/install-sh -c -s" \ install_sh_PROGRAM="/bin/sh /wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0/build-aux/install-sh -c -s" INSTALL_STRIP_FLAG=-s \ "INSTALL_PROGRAM_ENV=STRIPPROG='strip'" install; \ fi gmake[1]: Entering directory '/wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0' /usr/local/bin/gmake install-am gmake[2]: Entering directory '/wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0' gmake[3]: Entering directory '/wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0' /bin/mkdir -p '/wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib' /bin/sh ./libtool --mode=install /usr/bin/install -c -s ccp4/libccp4c.la fortran/libccp4f.la '/wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib' libtool: install: /usr/bin/install -c ccp4/.libs/libccp4c.so.0.0.0 /wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib/libccp4c.so.0.0.0 libtool: install: strip --strip-unneeded /wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib/libccp4c.so.0.0.0 libtool: install: (cd /wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib && { ln -s -f libccp4c.so.0.0.0 libccp4c.so.0 || { rm -f libccp4c.so.0 && ln -s libccp4c.so.0.0.0 libccp4c.so.0; }; }) libtool: install: (cd /wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib && { ln -s -f libccp4c.so.0.0.0 libccp4c.so || { rm -f libccp4c.so && ln -s libccp4c.so.0.0.0 libccp4c.so; }; }) libtool: install: /usr/bin/install -c ccp4/.libs/libccp4c.lai /wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib/libccp4c.la libtool: install: warning: relinking `fortran/libccp4f.la' libtool: install: (cd /wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0; /bin/sh /wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0/libtool --tag F77 --mode=relink gfortran14 -fno-second-underscore -fallow-argument-mismatch -no-undefined -Wl,-rpath=/usr/local/lib/gcc14 -L/usr/local/lib/gcc14 -L/usr/local/lib -o fortran/libccp4f.la -rpath /usr/local/lib fortran/fortran_libccp4f_la-ccp4_diskio_f.lo fortran/fortran_libccp4f_la-ccp4_parser_f.lo fortran/fortran_libccp4f_la-cmaplib_f.lo fortran/fortran_libccp4f_la-csymlib_f.lo fortran/fortran_libccp4f_la-ccp4_general_f.lo fortran/fortran_libccp4f_la-ccp4_unitcell_f.lo fortran/fortran_libccp4f_la-cmtzlib_f.lo fortran/fortran_libccp4f_la-library_f.lo fortran/ccplib.lo fortran/fftlib.lo fortran/modlib.lo fortran/parser.lo fortran/rwbrook.lo fortran/libhtml.lo fortran/keyparse.lo fortran/dna_output.lo fortran/pack_f.lo fortran/pxxml.lo fortran/lgglib.lo fortran/plot84lib.lo fortran/plotsubs.lo fortran/sorting_main.lo fortran/unix.lo ccp4/libccp4c.la -lmmdb2 -lm -inst-prefix-dir /wrkdirs/usr/ports/science/libccp4/work/stage) libtool: relink: gfortran14 -shared -fPIC fortran/.libs/fortran_libccp4f_la-ccp4_diskio_f.o fortran/.libs/fortran_libccp4f_la-ccp4_parser_f.o fortran/.libs/fortran_libccp4f_la-cmaplib_f.o fortran/.libs/fortran_libccp4f_la-csymlib_f.o fortran/.libs/fortran_libccp4f_la-ccp4_general_f.o fortran/.libs/fortran_libccp4f_la-ccp4_unitcell_f.o fortran/.libs/fortran_libccp4f_la-cmtzlib_f.o fortran/.libs/fortran_libccp4f_la-library_f.o fortran/.libs/ccplib.o fortran/.libs/fftlib.o fortran/.libs/modlib.o fortran/.libs/parser.o fortran/.libs/rwbrook.o fortran/.libs/libhtml.o fortran/.libs/keyparse.o fortran/.libs/dna_output.o fortran/.libs/pack_f.o fortran/.libs/pxxml.o fortran/.libs/lgglib.o fortran/.libs/plot84lib.o fortran/.libs/plotsubs.o fortran/.libs/sorting_main.o fortran/.libs/unix.o -Wl,-rpath -Wl,/usr/local/lib -L/usr/local/lib/gcc14 -L/usr/local/lib ccp4/.libs/libccp4c.so -lmmdb2 -lm -Wl,-rpath=/usr/local/lib/gcc14 -Wl,-soname -Wl,libccp4f.so.0 -o fortran/.libs/libccp4f.so.0.0.0 libtool: install: /usr/bin/install -c fortran/.libs/libccp4f.so.0.0.0T /wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib/libccp4f.so.0.0.0 libtool: install: strip --strip-unneeded /wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib/libccp4f.so.0.0.0 libtool: install: (cd /wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib && { ln -s -f libccp4f.so.0.0.0 libccp4f.so.0 || { rm -f libccp4f.so.0 && ln -s libccp4f.so.0.0.0 libccp4f.so.0; }; }) libtool: install: (cd /wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib && { ln -s -f libccp4f.so.0.0.0 libccp4f.so || { rm -f libccp4f.so && ln -s libccp4f.so.0.0.0 libccp4f.so; }; }) libtool: install: /usr/bin/install -c fortran/.libs/libccp4f.lai /wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib/libccp4f.la libtool: install: warning: remember to run `libtool --finish /usr/local/lib' /bin/mkdir -p '/wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/include/ccp4' install -m 0644 ccp4/ccp4_file_err.h ccp4/ccp4_program.h ccp4/ccp4_unitcell.h ccp4/cmap_errno.h ccp4/cmap_stats.h ccp4/csymlib.h ccp4/library_file.h ccp4/w32mvs.h ccp4/ccp4_fortran.h ccp4/ccp4_spg.h ccp4/ccp4_utils.h ccp4/cmap_header.h ccp4/cmaplib.h ccp4/cvecmat.h ccp4/mtzdata.h ccp4/ccp4_array.h ccp4/ccp4_general.h ccp4/ccp4_sysdep.h ccp4/ccp4_vars.h ccp4/cmap_labels.h ccp4/cmaplib_f.h ccp4/overview.h ccp4/ccp4_errno.h ccp4/ccp4_parser.h ccp4/ccp4_types.h ccp4/cmap_data.h ccp4/cmap_skew.h ccp4/cmtzlib.h ccp4/pack_c.h '/wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/include/ccp4' /bin/mkdir -p '/wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/share/ccp4' install -m 0644 ccp4-config.cmake '/wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/share/ccp4' /bin/mkdir -p '/wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/share' install -m 0644 data/atomsf_neutron.lib data/atomsf_electron.lib data/atomsf.lib data/syminfo.lib data/symop.lib data/font84.ascii '/wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/share' /bin/mkdir -p '/wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib/pkgconfig' install -m 0644 ccp4c.pc ccp4f.pc '/wrkdirs/usr/ports/science/libccp4/work/stage/usr/local/lib/pkgconfig' gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0' gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0' gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/libccp4/work/libccp4-8.0.0' ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2026-03-15T21:28:30+0000' 'PKG_NOTE_ports_top_git_hash=8c988f802ea2' 'PKG_NOTE_ports_top_checkout_unclean=no' 'PKG_NOTE_port_git_hash=a5c4a00572e5' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.2' NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building packages for libccp4-8.0.0 ===> Building libccp4-8.0.0 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for libccp4-8.0.0 build of science/libccp4 | libccp4-8.0.0 ended at Sun Mar 15 17:28:47 EDT 2026 build time: 00:00:17