=>> Building science/checkmol build started at Thu Mar 12 08:52:29 EDT 2026 port directory: /usr/ports/science/checkmol package name: checkmol-0.5_18 building for: FreeBSD pkg.DaveG.ca 14.4-RELEASE FreeBSD 14.4-RELEASE 1404000 amd64 maintained by: acm@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 823 Nov 24 20:51 /usr/ports/science/checkmol/Makefile Ports top last git commit: 26b198eb3ee3 Ports top unclean checkout: no Port dir last git commit: 0b43ad4b99a3 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.2 Host OSVERSION: 1500068 Jail OSVERSION: 1404000 Job Id: 16 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1404000 UNAME_v=FreeBSD 14.4-RELEASE 1404000 UNAME_r=14.4-RELEASE BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.2 MASTERMNT=/usr/local/poudriere/data/.m/freebsd_14_4_x64-HEAD-ALL/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=tmux-256color OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/freebsd_14_4_x64-HEAD-ALL/16/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=freebsd_14_4_x64-HEAD-ALL SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/freebsd_14_4_x64-HEAD-ALL/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.2 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- acm@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/checkmol/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/checkmol/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/checkmol/work/.cache HOME=/wrkdirs/usr/ports/science/checkmol/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/checkmol/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/checkmol/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/checkmol/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/checkmol/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/checkmol/work/.cache HOME=/wrkdirs/usr/ports/science/checkmol/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/checkmol/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/checkmol/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=14.4 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/checkmol" EXAMPLESDIR="share/examples/checkmol" DATADIR="share/checkmol" WWWDIR="www/checkmol" ETCDIR="etc/checkmol" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/checkmol DOCSDIR=/usr/local/share/doc/checkmol EXAMPLESDIR=/usr/local/share/examples/checkmol WWWDIR=/usr/local/www/checkmol ETCDIR=/usr/local/etc/checkmol --End SUB_LIST-- ---Begin make.conf--- DEFAULT_VERSIONS+=pgsql=15 DEFAULT_VERSIONS+=php=82 DISABLE_LICENSES=yes SELECTED_OPTIONS+=OPENBLAS ARCHDEF=AMD64K10h64SSE3 USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### DEFAULT_VERSIONS+=pgsql=15 DEFAULT_VERSIONS+=php=82 DISABLE_LICENSES=yes SELECTED_OPTIONS+=OPENBLAS ARCHDEF=AMD64K10h64SSE3 WITH_CCACHE_BUILD=yes CCACHE_DIR=/root/.ccache #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> checkmol-0.5_18 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.6.2.pkg [pkg.DaveG.ca] Installing pkg-2.6.2... [pkg.DaveG.ca] Extracting pkg-2.6.2: .......... done ===> checkmol-0.5_18 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of checkmol-0.5_18 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by checkmol-0.5_18 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by checkmol-0.5_18 for building => SHA256 Checksum OK for checkmol. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by checkmol-0.5_18 for building ===> Extracting for checkmol-0.5_18 => SHA256 Checksum OK for checkmol. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for checkmol-0.5_18 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> checkmol-0.5_18 depends on file: /usr/local/bin/as - not found ===> Installing existing package /packages/All/binutils-2.44,1.pkg [pkg.DaveG.ca] Installing binutils-2.44,1... [pkg.DaveG.ca] `-- Installing indexinfo-0.3.1_1... [pkg.DaveG.ca] `-- Extracting indexinfo-0.3.1_1: . done [pkg.DaveG.ca] `-- Installing zstd-1.5.7_1... [pkg.DaveG.ca] `-- Extracting zstd-1.5.7_1: .......... done [pkg.DaveG.ca] Extracting binutils-2.44,1: .......... done ===> checkmol-0.5_18 depends on file: /usr/local/bin/as - found ===> Returning to build of checkmol-0.5_18 ===> checkmol-0.5_18 depends on file: /usr/local/lib/fpc/3.2.3/ppcx64 - not found ===> Installing existing package /packages/All/fpc-3.2.3_2.pkg [pkg.DaveG.ca] Installing fpc-3.2.3_2... [pkg.DaveG.ca] Extracting fpc-3.2.3_2: .......... done ===== Message from fpc-3.2.3_2: -- 1) Add lib paths to /usr/local/etc/fpc.cfg # searchpath for libraries -Fl/usr/local/lib This is necessary for correct linking of libraries. 2) If you want to see all documentation about FreePascal, you can install * lang/fpc-docs 3) Take on mind that fpc only works with binutils on this moment but could work with another ld tool later on next versions of freepascal 4) Enjoy it ;) ===> checkmol-0.5_18 depends on file: /usr/local/lib/fpc/3.2.3/ppcx64 - found ===> Returning to build of checkmol-0.5_18 ===> checkmol-0.5_18 depends on file: /usr/local/bin/ccache - not found ===> Installing existing package /packages/All/ccache-3.7.12_8.pkg [pkg.DaveG.ca] Installing ccache-3.7.12_8... [pkg.DaveG.ca] Extracting ccache-3.7.12_8: ......... done Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for clang create symlink for clang (world) create symlink for clang++ create symlink for clang++ (world) ===== Message from ccache-3.7.12_8: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. ===> checkmol-0.5_18 depends on file: /usr/local/bin/ccache - found ===> Returning to build of checkmol-0.5_18 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for checkmol-0.5_18 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for checkmol-0.5_18 (cd /wrkdirs/usr/ports/science/checkmol/work/checkmol-0.5_18 && /usr/local/bin/fpc checkmol -S2 -O3) Free Pascal Compiler version 3.2.3 [2026/03/10] for x86_64 Copyright (c) 1993-2024 by Florian Klaempfl and others Target OS: FreeBSD for x86-64 Compiling checkmol Linking checkmol /usr/local/bin/ld.bfd: warning: /usr/local/lib/fpc/3.2.3/units/x86_64-freebsd/rtl/prt0.o: missing .note.GNU-stack section implies executable stack /usr/local/bin/ld.bfd: NOTE: This behaviour is deprecated and will be removed in a future version of the linker 14390 lines compiled, 0.9 sec =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for checkmol-0.5_18 ===> Generating temporary packing list (cd /wrkdirs/usr/ports/science/checkmol/work/checkmol-0.5_18 && install -s -m 555 checkmol /wrkdirs/usr/ports/science/checkmol/work/stage/usr/local/bin/checkmol) (cd /wrkdirs/usr/ports/science/checkmol/work/stage/usr/local/bin && /bin/ln checkmol matchmol) ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2026-03-12T12:52:29+0000' 'PKG_NOTE_ports_top_git_hash=26b198eb3ee3' 'PKG_NOTE_ports_top_checkout_unclean=no' 'PKG_NOTE_port_git_hash=0b43ad4b99a3' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.2' NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building packages for checkmol-0.5_18 ===> Building checkmol-0.5_18 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for checkmol-0.5_18 build of science/checkmol | checkmol-0.5_18 ended at Thu Mar 12 08:52:33 EDT 2026 build time: 00:00:05