=>> Building science/py-rmf build started at Mon Dec 15 14:21:35 EST 2025 port directory: /usr/ports/science/py-rmf package name: py311-rmf-1.7.0 building for: FreeBSD pkg.DaveG.ca 14.3-RELEASE-p1 FreeBSD 14.3-RELEASE-p1 1403000 amd64 maintained by: yuri@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 1200 Aug 6 08:11 /usr/ports/science/py-rmf/Makefile Ports top last git commit: 10f7dee57a4c Ports top unclean checkout: no Port dir last git commit: 9dd55ca0ce8d Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.2 Host OSVERSION: 1500068 Jail OSVERSION: 1403000 Job Id: 09 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1403000 UNAME_v=FreeBSD 14.3-RELEASE-p1 1403000 UNAME_r=14.3-RELEASE-p1 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.2 MASTERMNT=/usr/local/poudriere/data/.m/freebsd_14_3_x64-HEAD-ALL/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=tmux-256color OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/freebsd_14_3_x64-HEAD-ALL/09/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=freebsd_14_3_x64-HEAD-ALL SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/freebsd_14_3_x64-HEAD-ALL/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.2 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-rmf/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-rmf/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-rmf/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-rmf/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-rmf/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-rmf/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- NINJA_STATUS="[%p %s/%t] " XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-rmf/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-rmf/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-rmf/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-rmf/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-rmf/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-rmf/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/py-rmf/work-py311/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -lRMF -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=14.3 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/rmf" EXAMPLESDIR="share/examples/rmf" DATADIR="share/rmf" WWWDIR="www/rmf" ETCDIR="etc/rmf" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/rmf DOCSDIR=/usr/local/share/doc/rmf EXAMPLESDIR=/usr/local/share/examples/rmf WWWDIR=/usr/local/www/rmf ETCDIR=/usr/local/etc/rmf --End SUB_LIST-- ---Begin make.conf--- DEFAULT_VERSIONS+=pgsql=15 DEFAULT_VERSIONS+=php=82 DISABLE_LICENSES=yes SELECTED_OPTIONS+=OPENBLAS ARCHDEF=AMD64K10h64SSE3 USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### DEFAULT_VERSIONS+=pgsql=15 DEFAULT_VERSIONS+=php=82 DISABLE_LICENSES=yes SELECTED_OPTIONS+=OPENBLAS ARCHDEF=AMD64K10h64SSE3 WITH_CCACHE_BUILD=yes CCACHE_DIR=/root/.ccache #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-rmf-1.7.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.4.2_1.pkg [pkg.DaveG.ca] Installing pkg-2.4.2_1... [pkg.DaveG.ca] Extracting pkg-2.4.2_1: .......... done ===> py311-rmf-1.7.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-rmf-1.7.0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-rmf-1.7.0 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-rmf-1.7.0 for building => SHA256 Checksum OK for salilab-rmf-1.7.0_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-rmf-1.7.0 for building ===> Extracting for py311-rmf-1.7.0 => SHA256 Checksum OK for salilab-rmf-1.7.0_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for py311-rmf-1.7.0 ===> Applying FreeBSD patches for py311-rmf-1.7.0 from /usr/ports/science/py-rmf/files =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-rmf-1.7.0 depends on executable: swig - not found ===> Installing existing package /packages/All/swig-4.3.1.pkg [pkg.DaveG.ca] Installing swig-4.3.1... [pkg.DaveG.ca] `-- Installing pcre2-10.47_1... [pkg.DaveG.ca] `-- Extracting pcre2-10.47_1: .......... done [pkg.DaveG.ca] Extracting swig-4.3.1: .......... done ===> py311-rmf-1.7.0 depends on executable: swig - found ===> Returning to build of py311-rmf-1.7.0 ===> py311-rmf-1.7.0 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-core-3.31.10.pkg [pkg.DaveG.ca] Installing cmake-core-3.31.10... [pkg.DaveG.ca] `-- Installing expat-2.7.3... [pkg.DaveG.ca] `-- Extracting expat-2.7.3: .......... done [pkg.DaveG.ca] `-- Installing jsoncpp-1.9.6_1... [pkg.DaveG.ca] `-- Extracting jsoncpp-1.9.6_1: .......... done [pkg.DaveG.ca] `-- Installing libidn2-2.3.8... [pkg.DaveG.ca] | `-- Installing indexinfo-0.3.1_1... [pkg.DaveG.ca] | `-- Extracting indexinfo-0.3.1_1: . done [pkg.DaveG.ca] | `-- Installing libunistring-1.4.1... [pkg.DaveG.ca] | `-- Extracting libunistring-1.4.1: .......... done [pkg.DaveG.ca] `-- Extracting libidn2-2.3.8: .......... done [pkg.DaveG.ca] `-- Installing libuv-1.51.0... [pkg.DaveG.ca] `-- Extracting libuv-1.51.0: .......... done [pkg.DaveG.ca] `-- Installing rhash-1.4.4_2... [pkg.DaveG.ca] | `-- Installing gettext-runtime-0.23.1... [pkg.DaveG.ca] | `-- Extracting gettext-runtime-0.23.1: .......... done [pkg.DaveG.ca] `-- Extracting rhash-1.4.4_2: .......... done [pkg.DaveG.ca] Extracting cmake-core-3.31.10: .......... done ===> py311-rmf-1.7.0 depends on file: /usr/local/bin/cmake - found ===> Returning to build of py311-rmf-1.7.0 ===> py311-rmf-1.7.0 depends on executable: ninja - not found ===> Installing existing package /packages/All/ninja-1.13.1,4.pkg [pkg.DaveG.ca] Installing ninja-1.13.1,4... [pkg.DaveG.ca] `-- Installing python311-3.11.14... [pkg.DaveG.ca] | `-- Installing libffi-3.5.1... [pkg.DaveG.ca] | `-- Extracting libffi-3.5.1: .......... done [pkg.DaveG.ca] | `-- Installing mpdecimal-4.0.1... [pkg.DaveG.ca] | `-- Extracting mpdecimal-4.0.1: .......... done [pkg.DaveG.ca] | `-- Installing readline-8.3.1... [pkg.DaveG.ca] | `-- Extracting readline-8.3.1: .......... done [pkg.DaveG.ca] `-- Extracting python311-3.11.14: .......... done [pkg.DaveG.ca] Extracting ninja-1.13.1,4: ..... done ===== Message from python311-3.11.14: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-rmf-1.7.0 depends on executable: ninja - found ===> Returning to build of py311-rmf-1.7.0 ===> py311-rmf-1.7.0 depends on file: /usr/local/bin/python3.11 - found ===> py311-rmf-1.7.0 depends on file: /usr/local/bin/ccache - not found ===> Installing existing package /packages/All/ccache-3.7.12_8.pkg [pkg.DaveG.ca] Installing ccache-3.7.12_8... [pkg.DaveG.ca] Extracting ccache-3.7.12_8: ......... done Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for clang create symlink for clang (world) create symlink for clang++ create symlink for clang++ (world) ===== Message from ccache-3.7.12_8: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. ===> py311-rmf-1.7.0 depends on file: /usr/local/bin/ccache - found ===> Returning to build of py311-rmf-1.7.0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-rmf-1.7.0 depends on shared library: libRMF.so - not found ===> Installing existing package /packages/All/rmf-1.7.0_3.pkg [pkg.DaveG.ca] Installing rmf-1.7.0_3... [pkg.DaveG.ca] `-- Installing boost-libs-1.89.0_1... [pkg.DaveG.ca] | `-- Installing icu-76.1,1... [pkg.DaveG.ca] | `-- Extracting icu-76.1,1: .......... done [pkg.DaveG.ca] | `-- Installing zstd-1.5.7_1... [pkg.DaveG.ca] | `-- Extracting zstd-1.5.7_1: .......... done [pkg.DaveG.ca] `-- Extracting boost-libs-1.89.0_1: .......... done [pkg.DaveG.ca] `-- Installing hdf5-1.12.2_2,1... [pkg.DaveG.ca] | `-- Installing gcc13-13.3.0_3... [pkg.DaveG.ca] | | `-- Installing binutils-2.44,1... [pkg.DaveG.ca] | | `-- Extracting binutils-2.44,1: .......... done [pkg.DaveG.ca] | | `-- Installing gmp-6.3.0... [pkg.DaveG.ca] | | `-- Extracting gmp-6.3.0: .......... done [pkg.DaveG.ca] | | `-- Installing mpc-1.3.1_1... [pkg.DaveG.ca] | | `-- Installing mpfr-4.2.2,1... [pkg.DaveG.ca] | | `-- Extracting mpfr-4.2.2,1: .......... done [pkg.DaveG.ca] | | `-- Extracting mpc-1.3.1_1: ...... done [pkg.DaveG.ca] | `-- Extracting gcc13-13.3.0_3: .......... done create symlink for gcc13 create symlink for gcc13 (world) create symlink for g++13 create symlink for g++13 (world) create symlink for cpp13 create symlink for cpp13 (world) [pkg.DaveG.ca] | `-- Installing libaec-1.1.4... [pkg.DaveG.ca] | `-- Extracting libaec-1.1.4: .......... done [pkg.DaveG.ca] `-- Extracting hdf5-1.12.2_2,1: .......... done [pkg.DaveG.ca] Extracting rmf-1.7.0_3: .......... done ===== Message from boost-libs-1.89.0_1: -- You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. ===== Message from gcc13-13.3.0_3: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc13 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> py311-rmf-1.7.0 depends on shared library: libRMF.so - found (/usr/local/lib/libRMF.so) ===> Returning to build of py311-rmf-1.7.0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for py311-rmf-1.7.0 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/science/py-rmf/work-py311/.build -- The C compiler identification is Clang 19.1.7 -- The CXX compiler identification is Clang 19.1.7 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/libexec/ccache/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/libexec/ccache/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Could NOT find Python3 (missing: Python3_NumPy_INCLUDE_DIRS NumPy) (found version "3.11.14") CMake Deprecation Warning at CMakeLists.txt:43 (cmake_policy): The OLD behavior for policy CMP0078 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1449 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1574 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2186 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:59 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1449 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1574 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2186 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:59 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1449 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1574 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2186 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:59 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1449 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1574 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2186 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:59 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1449 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1574 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2186 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:59 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1449 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1574 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2186 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:59 (find_package) CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:1449 (message): New Boost version may have incorrect or missing dependencies and imported targets Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindBoost.cmake:1574 (_Boost_COMPONENT_DEPENDENCIES) /usr/local/share/cmake/Modules/FindBoost.cmake:2186 (_Boost_MISSING_DEPENDENCIES) CMakeLists.txt:59 (find_package) -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Found Boost: /usr/local/include (found version "1.89.0") found components: filesystem thread program_options iostreams chrono atomic regex -- Found HDF5: hdf5-shared (found version "1.12.2") -- Deprecated backends (and hdf5) are enabled -- clang version: 19.1.7 -- Enabling clang C++17 support -- Running Making RMF/HDF5.h -- Updating /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/include/RMF/HDF5.h -- Running Making RMF.h -- Updating /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/include/RMF.h -- Running setup_cmake.py -- Running Running setup_cmake.py -- Updating ./bin/Files.cmake Updating ./examples/Files.cmake Updating ./benchmark/Files.cmake Updating ./tools/dev_tools/test/Files.cmake Updating ./src/Files.cmake Updating ./test/Files.cmake -- Logging disabled -- Found SWIG: /usr/local/bin/swig (found suitable version "4.3.1", minimum required is "1.3.40") -- Configuring done (22.0s) -- Generating done (0.3s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_COLOR_MAKEFILE CMAKE_C_FLAGS_RELEASE CMAKE_SHARED_LINKER_FLAGS CMAKE_VERBOSE_MAKEFILE FETCHCONTENT_FULLY_DISCONNECTED Python_ADDITIONAL_VERSIONS Python_EXECUTABLE -- Build files have been written to: /wrkdirs/usr/ports/science/py-rmf/work-py311/.build =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for py311-rmf-1.7.0 [ 14% 2/7] cd /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/swig && /usr/local/bin/cmake -E make_directory /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/swig/CMakeFiles/_RMF_HDF5.dir /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/lib /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/lib && /usr/local/bin/cmake -E env SWIG_LIB=/usr/local/share/swig/4.3.1 /usr/local/bin/swig -python -castmode -naturalvar -Wextra -fvirtual -DPySwigIterator=RMF_HDF5_PySwigIterator -c++ -DSwigPyIterator=RMF_HDF5_SwigPyIterator -DRMFEXPORT -outdir /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/lib -c++ -interface _RMF_HDF5 -I/wrkdirs/usr/ports/science/py-rmf/work-py311/rmf-1.7.0/swig -I/wrkdirs/usr/ports/science/py-rmf/work-py311/rmf-1.7.0/include -I/wrkdirs/usr/ports/science/py-rmf/work-py311/.build/include -I/usr/local/include -I/usr/local/include/python3.11 -o /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/lib/RMF_HDF5PYTHON_wrap.cxx /wrkdirs/usr/ports/science/py-rmf/work-py311/rmf-1.7.0/swig/RMF_HDF5.i [ 28% 3/7] cd /wrkdirs/usr/ports/science/py-rmf/work-py311/.build && /usr/local/bin/python3.11 /wrkdirs/usr/ports/science/py-rmf/work-py311/rmf-1.7.0/tools/build/make_decorators.py [ 42% 4/7] cd /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/swig && /usr/local/bin/cmake -E make_directory /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/swig/CMakeFiles/_RMF.dir /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/lib /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/lib && /usr/local/bin/cmake -E env SWIG_LIB=/usr/local/share/swig/4.3.1 /usr/local/bin/swig -python -castmode -naturalvar -Wextra -fvirtual -DPySwigIterator=RMF_PySwigIterator -c++ -DSwigPyIterator=RMF_SwigPyIterator -DRMFEXPORT -outdir /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/lib -c++ -interface _RMF -I/wrkdirs/usr/ports/science/py-rmf/work-py311/rmf-1.7.0/swig -I/wrkdirs/usr/ports/science/py-rmf/work-py311/rmf-1.7.0/include -I/wrkdirs/usr/ports/science/py-rmf/work-py311/.build/include -I/usr/local/include -I/usr/local/include/python3.11 -o /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/lib/RMFPYTHON_wrap.cxx /wrkdirs/usr/ports/science/py-rmf/work-py311/rmf-1.7.0/swig/RMF.i /wrkdirs/usr/ports/science/py-rmf/work-py311/rmf-1.7.0/include/RMF/BufferConstHandle.h:47: Warning 467: Overloaded method RMF::BufferConstHandle::BufferConstHandle(std::vector< char,std::allocator< char > > const &) not supported (incomplete type checking rule - no precedence level in typecheck typemap for 'std::vector< char,std::allocator< char > > const &'). [ 57% 5/7] /usr/local/libexec/ccache/c++ -DRMF_SWIG_WRAPPER -D_RMF_HDF5_EXPORTS -I/wrkdirs/usr/ports/science/py-rmf/work-py311/rmf-1.7.0/swig -I/wrkdirs/usr/ports/science/py-rmf/work-py311/rmf-1.7.0/include -I/wrkdirs/usr/ports/science/py-rmf/work-py311/.build/include -I/usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -DNDEBUG -fPIC --std=c++17 -MD -MT swig/CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o -MF swig/CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o.d -o swig/CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o -c /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/lib/RMF_HDF5PYTHON_wrap.cxx [ 71% 6/7] : && /usr/local/libexec/ccache/c++ -fPIC -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -DNDEBUG -lRMF -L/usr/local/lib -Xlinker --dependency-file=swig/CMakeFiles/_RMF_HDF5.dir/link.d -shared -o lib/_RMF_HDF5.so swig/CMakeFiles/_RMF_HDF5.dir/__/lib/RMF_HDF5PYTHON_wrap.cxx.o && : [ 85% 6/7] /usr/local/libexec/ccache/c++ -DRMF_SWIG_WRAPPER -D_RMF_EXPORTS -I/wrkdirs/usr/ports/science/py-rmf/work-py311/rmf-1.7.0/swig -I/wrkdirs/usr/ports/science/py-rmf/work-py311/rmf-1.7.0/include -I/wrkdirs/usr/ports/science/py-rmf/work-py311/.build/include -I/usr/local/include/python3.11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -DNDEBUG -fPIC --std=c++17 -MD -MT swig/CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o -MF swig/CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o.d -o swig/CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o -c /wrkdirs/usr/ports/science/py-rmf/work-py311/.build/lib/RMFPYTHON_wrap.cxx [100% 7/7] : && /usr/local/libexec/ccache/c++ -fPIC -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -DNDEBUG -lRMF -L/usr/local/lib -Xlinker --dependency-file=swig/CMakeFiles/_RMF.dir/link.d -shared -o lib/_RMF.so swig/CMakeFiles/_RMF.dir/__/lib/RMFPYTHON_wrap.cxx.o && : =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-rmf-1.7.0 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for py311-rmf-1.7.0 ===> Generating temporary packing list [ 0% 1/1] cd /wrkdirs/usr/ports/science/py-rmf/work-py311/.build && /usr/local/bin/cmake -DCMAKE_INSTALL_DO_STRIP=1 -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /wrkdirs/usr/ports/science/py-rmf/work-py311/stage/usr/local/lib/python3.11/site-packages/_RMF.so -- Installing: /wrkdirs/usr/ports/science/py-rmf/work-py311/stage/usr/local/lib/python3.11/site-packages/RMF.py -- Installing: /wrkdirs/usr/ports/science/py-rmf/work-py311/stage/usr/local/lib/python3.11/site-packages/_RMF_HDF5.so -- Installing: /wrkdirs/usr/ports/science/py-rmf/work-py311/stage/usr/local/lib/python3.11/site-packages/RMF_HDF5.py ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2025-12-15T19:21:35+0000' 'PKG_NOTE_ports_top_git_hash=10f7dee57a4c' 'PKG_NOTE_ports_top_checkout_unclean=no' 'PKG_NOTE_port_git_hash=9dd55ca0ce8d' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.2' NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building packages for py311-rmf-1.7.0 ===> Building py311-rmf-1.7.0 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for py311-rmf-1.7.0 build of science/py-rmf@py311 | py311-rmf-1.7.0 ended at Mon Dec 15 14:27:27 EST 2025 build time: 00:05:53